last update : january 2015

Public data retrieved in 2014



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AT4G34200 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT4G34200
Master Protein AT4G34200.1
Description (curated) EDA9 (embryo sac development arrest 9); NAD binding / amino acid binding / binding / catalytic/ cofactor binding / oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor / phosphoglycerate dehydrogenase
Calculated MW (PPDB) 63.32
Calculated PI (PPDB) 6.16
Length 603
Curated Annotation
Description (curated) 3-PGDH (EDA9) D-3-phosphoglycerate dehydrogenase, EMBRYO SAC DEVELOPMENT ARREST 9, chloroplast precursor (EC 1.1.1.95) /
Function (curated) metabolism aa Ser
Localization (curated) Ch/S
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
KQAIMAIGVDDIPSK 1,616.84432 0.32 68.1 4
VGTEVAR 730.39731 0.12 37 4
QAIMAIGVDDIPSKETLKK 2,088.11360 0.32 45.6 2
VIAHDPYAPADR 1,323.65712 0.24 40.3 2
ATDDLDTR 905.40904 0.16 66 21
YVGVSLVGK 920.53305 0.34 36 2
LAVQLVAGGSGVK 1,197.70804 0.33 99.1 50
FASSLSESGEVK 1,239.59824 0.27 81.4 7
EVFESSHGR 1,046.47807 0.15 51.2 30
ISLCDALIVR 1,149.60632 0.50 29.3 1
TLAVLGFGK 904.53815 0.41 65.7 7
VLLDGSPESPLETITVQLSNVESK 2,554.33771 0.61 65.2 2
IGEIPAVEEFVFLK 1,589.87041 0.60 73.9 5
QAIMAIGVDDIPSK 1,472.75444 0.36 79.9 1
GGVIDEDALVR 1,142.59309 0.34 68.1 54
GIIEPISDVYVNLVNADFTAK 2,277.18918 0.64 94.7 1
ILNDETFAK 1,049.53929 0.29 62.1 17
NVAQADASVK 1,001.51413 0.16 66.5 32
QAIMAIGVDDIPSK 1,488.74936 0.36 44.5 2
VKDGVPHLTK 1,092.62910 0.18 50.2 3
ALDAGIVAQAALDVFTK 1,701.93007 0.63 118.1 6
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 3.51 0 96.49 243 STR
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 1.77535 0.00019 LAM_high