last update : january 2015

Public data retrieved in 2014



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AT4G29060 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT4G29060
Master Protein AT4G29060.1
Description (curated) EMB2726 (EMBRYO DEFECTIVE 2726); translation elongation factor
Calculated MW (PPDB) 103.78
Calculated PI (PPDB) 4.95
Length 953
Curated Annotation
Description (curated) PSRP-7 (EF-Ts-like) translation elongation factor Ts family protein, homologue of C. reinhardtii PETS, chloroplast precursor /
Function (curated) translation stroma
Localization (curated) Ch/S
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
KALAATGGDLEK 1,172.64004 0.19 43.7 4
LVEADIESKR 1,158.62440 0.22 87.7 67
QLREETGAGMMDCKNALSESEGDMVK 2,972.19905 0.27 70.2 6
ATGTDVVAAVEEQDSTPVVAEDKETVASEKSDAPAPTSQSR 4,171.98796 0.39 31.4 1
KGEGFNSK 865.42932 0.08 52.4 9
GQMLDGVVK 977.48514 0.24 67.2 16
LVEADIESK 1,002.52330 0.24 62.9 12
QTVATLGENIK 1,172.64006 0.29 67.3 63
AKEEPKAEEAK 1,228.62987 0.05 72.7 24
EDLLSKPENIR 1,312.69864 0.28 48.8 7
EETGAGMMDCKNALSESEGDMVK 2,574.95531 0.27 53.5 3
NEELVPGATFTGK 1,361.68263 0.35 82.4 23
SQDFAAEVAAQTAAKPK 1,731.87910 0.32 135.4 49
NALSESEGDMVK 1,294.57104 0.21 40.8 1
QLREETGAGMMDCKK 1,807.73860 0.14 67.7 19
ALAATGGDLEKAQEFLR 1,788.93694 0.40 95.3 3
EDLLSKPEQIR 1,326.71429 0.29 30 1
SQDFAAEVAAQTAAK 1,506.73138 0.35 50.9 2
KSQDFAAEVAAQTAAKPK 1,859.97406 0.28 128.1 19
KGLASADKK 916.53413 0.04 41.2 3
EETGAGMMDCK 1,170.43549 0.27 25.8 1
EKEIEMQR 1,093.50734 0.11 41.5 5
EETGAGMMDCKK 1,410.49486 0.07 36.8 4
EKIVEGR 829.46571 0.11 38.2 1
ATGTDVVAAVEEQDSTPVVAEDKETVASEK 3,074.47781 0.38 114.8 2
DVSSVVTIGQEVK 1,359.72450 0.37 97.7 20
EIEMQKEDLLSKPEQIR 2,117.06738 0.29 84.4 13
GLSSADKK 804.43410 0.06 37.7 10
EIEMQREDLLSKPENIR 2,131.05788 0.29 55.8 3
SEMPAVKNEELVPGATFTGK 2,136.04080 0.33 69.8 5
EAVASPPTTVVSAALVK 1,638.91917 0.39 71.9 47
EQVVAETPVDEVK 1,441.72998 0.30 43.5 1
EKIVDGR 815.45007 0.10 34.5 2
SDAPAPTSQSR 1,115.52071 0.12 89.8 59
KNEEIAAFLDK 1,276.66626 0.35 53.2 3
YTLGEGLEK 1,008.51273 0.31 35.7 8
ALAATGGDLEK 1,044.54509 0.22 58 14
RLDSLALLEQPYIKDDK 2,016.08911 0.39 35.8 1
KSEMPAVKNEELVPGATFTGK 2,264.13576 0.30 66.2 6
IGSYIHDSR 1,046.51448 0.19 74.1 33
IGAYIHDSR 1,030.51956 0.20 72 32
VVEEEVIATK 1,115.60735 0.26 72 80
KNEEIAAFLDKR 1,432.76736 0.32 65.2 11
NALSESEGDMVK 1,278.57613 0.28 36.4 2
NEEIAAFLDKR 1,304.67241 0.36 41.8 2
QLREETGAGMMDCK 1,679.64365 0.17 95.5 9
GISPALVK 783.48540 0.26 34.6 5
TPAPVVTEASSEESGNTATAESIK 2,375.13393 0.31 152.6 7
GLASADKK 788.43918 0.07 38.3 6
SSRLASEGR 961.49406 0.18 37.1 1
VRLVEADIESK 1,257.69281 0.25 35.5 1
ISLTMRENDDPPKR 1,702.83081 0.21 53.9 13
YTLGEGLEKK 1,136.60768 0.27 27.2 1
IATIGENIK 957.54945 0.26 63 7
NALSESEGDMVK 1,310.56596 0.23 78.7 20
VRLVEADIESKR 1,413.79392 0.24 39.9 2
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 3.71 1.79 94.5 719 STR
Reference of the experiment Reference date Sample CAM Binding Protein
cam_bp 2013-01-01 00:00:00 CET Arabidopsis_stroma;
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST -0.86846 0.02333 BBY_medium