last update : january 2015
Public data retrieved in 2014
AT4G28750 protein group
|
Protein AT4G28750
|
| Master Protein |
AT4G28750.1 |
| Description (curated) |
PSAE-1 (PSA E1 KNOCKOUT); catalytic |
| Calculated MW (PPDB) |
14.96 |
| Calculated PI (PPDB) |
9.92 |
| Length |
143 |
|
|
Curated Annotation
|
| Description (curated) |
PSAE-1 Photosystem I reaction center subunit IV A, chloroplast precursor / |
| Function (curated) |
PS PSI |
| Localization (curated) |
Ch/Th & Ch/E |
| Localization (validated) |
Yes
|
| References |
|
| Curated Protein Name |
|
| Publication (PPDB) |
|
|
|
Peptides
|
| Sequence |
Monoisotopic mass |
Retention Time |
Score |
Observed MS/MS count |
| DSPAAAAAPDGATATKPK |
1,638.82127 |
0.18 |
60.1 |
4 |
| NVGSVVAVDQDPKTR |
1,583.82668 |
0.24 |
103.4 |
4 |
| NVGSVVAVDQDPK |
1,326.67789 |
0.26 |
108.2 |
64 |
| NVGSVVAVDQDPKTRYPVVVR |
2,297.24908 |
0.32 |
50.9 |
1 |
| TRYPVVVR |
988.58176 |
0.22 |
35.7 |
6 |
| PKPPPIGPK |
929.56981 |
0.18 |
22 |
1 |
| DSPAAAAAPDGATATK |
1,413.67355 |
0.19 |
89.6 |
17 |
| DSPAAAAAPDGATATKPKPPPIGPK |
2,325.23280 |
0.25 |
93.3 |
44 |
| VNYANISTNNYALDEVEEVAA |
2,298.06509 |
0.54 |
94.8 |
10 |
| AAEDPAPASSSSK |
1,216.55713 |
0.12 |
94.3 |
86 |
| AAEDPAPASSSSKDSPAAAAAPDGATATK |
2,612.22012 |
0.22 |
74.1 |
1 |
| Reference of the experiment |
Reference date |
score % of enveloppe |
score % of thylakoïd |
score % of stroma |
Total spectral count |
Localization Score |
| at_chloro_v1 |
2010 06 |
23.29 |
75.39 |
1.32 |
225 |
THY-ENV |
| Reference of the experiment |
Reference date |
Log Fold Change |
pValue |
Curated Protein Complex Classes |
Differentially distributed proteins high or medium |
| thylakoïd_sub_compartments |
2013-10-01 00:00:00 CEST |
0.72936 |
0.00018 |
|
LAM_medium |