last update : january 2015

Public data retrieved in 2014



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AT4G20360 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT4G20360
Master Protein AT4G20360.1
Description (curated) AtRABE1b/AtRab8D (Arabidopsis Rab GTPase homolog E1b); translation elongation factor
Calculated MW (PPDB) 51.63
Calculated PI (PPDB) 5.83
Length 476
Curated Annotation
Description (curated) EFTU (EF-Tu-1, TUFA, RABE1b) elongation factor Tu, RAB GTPase homolog E1B, chloroplast precursor /
Function (curated) translation stroma / signalling / SNARE effector
Localization (curated) Ch/S & Ch/Th
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
ELLSSYEFNGDDIPIISGSALLAVETLTENPK 3,434.73436 0.72 95.5 15
HSPFFAGYR 1,080.51407 0.31 28.8 1
MVMPGDR 868.34187 0.14 39.7 13
EHILLAK 822.49631 0.23 42.6 10
GMVLAKPGSITPHTK 1,567.83917 0.22 64 18
MVMPGDR 836.35204 0.14 27.3 5
IYELMDAVDDYIPIPQR 2,050.00809 0.57 71.3 3
IMNDKDEESK 1,239.52887 0.07 82.7 84
GTVATGRVER 1,044.56755 0.12 49.7 10
IMNDKDEESK 1,223.53395 0.10 59.8 25
ILDEALAGDNVGLLLR 1,680.94096 0.51 129.5 146
VGETVDLVGLRETR 1,542.83650 0.33 63.3 42
YDEIDAAPEER 1,306.56769 0.26 77.5 27
VGETVDLVGLR 1,156.64513 0.38 116.6 201
GIQKADIQR 1,027.57741 0.14 73 7
KKPHVNIGTIGHVDHGK 1,836.01178 0.20 91.9 4
HSPFFAGYRPQFYMR 1,934.88856 0.38 40.7 2
MVMPGDRVK 1,095.50523 0.15 38.2 9
NMITGAAQMDGAILVVSGADGPMPQTK 2,736.27678 0.42 80.3 4
NMITGAAQMDGAILVVSGADGPMPQTK 2,768.26662 0.43 131.3 16
QVGVPDMVVFLNK 1,476.76459 0.42 67.8 21
TTLTAALTMALASIGSSVAK 1,922.03938 0.66 121 62
QTELPFLLAVEDVFSITGR 2,134.13095 0.73 146.7 101
IMNDKDEESKMVMPGDR 2,089.86018 0.17 108.6 39
GITINTATVEYETENR 1,809.87442 0.38 118.6 58
QVGVPDMVVFLNK 1,444.77475 0.53 38.5 1
IYELMDAVDDYIPIPQR 2,081.99792 0.54 92.3 11
EDQVDDAELLELVELEVR 2,113.04259 0.63 137.8 24
HYAHVDCPGHADYVK 1,758.74197 0.22 93.5 9
IMNDKDEESKMVMPGDR 2,057.87035 0.16 24.4 1
QVGVPDMVVFLNKEDQVDDAELLELVELEVR 3,571.79662 0.62 73 4
MVMPGDR 852.34695 0.14 28.8 5
KYDEIDAAPEER 1,434.66264 0.23 106.7 109
SYTVTGVEMFQK 1,388.66455 0.40 59.8 3
QVGVPDMVVFLNK 1,460.76967 0.41 75.3 24
PGSITPHTK 936.50287 0.11 59 17
IVVELIVPVACEQGMR 1,834.91679 0.51 64.3 5
IMNDKDEESK 1,207.53903 0.11 74.6 4
GTVATGR 660.35545 0.09 33.7 3
SYTVTGVEMFQK 1,404.65947 0.34 71.4 15
IMNDKDEESKMVMPGDR 2,073.86526 0.17 44.8 3
KPHVNIGTIGHVDHGK 1,707.91682 0.22 56.5 5
KYDEIDAAPEERAR 1,661.80086 0.23 39.2 1
NMITGAAQMDGAILVVSGADGPMPQTK 2,752.27170 0.42 78.6 3
TTLTAALTMALASIGSSVAK 1,938.03430 0.66 106.9 58
EGGKTVGAGVIGTILE 1,499.81943 0.42 47.6 4
TTLTAALTMALASIGSSVAK 1,906.04446 0.69 84.2 8
TVGAGVIGTILE 1,128.63898 0.51 79.4 64
TTDVTGKVTK 1,048.57642 0.14 49 2
SYTVTGVEMFQK 1,420.65439 0.34 75.9 40
IYELMDAVDDYIPIPQR 2,066.00301 0.53 117.8 12
IVVELIVPVACEQGMR 1,818.92188 0.51 74.3 10
TTDVTGK 720.36537 0.09 41.9 6
FEAIIYVLK 1,094.63753 0.47 65.6 40
NMITGAAQMDGAILVVSGADGPMPQTK 2,720.28186 0.40 101 4
GMVLAKPGSITPHTK 1,551.84425 0.22 25.5 1
VTKIMNDKDEESK 1,567.73991 0.09 40.1 1
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 8.2 19.09 72.71 1,376 STR-THY
Reference of the experiment Reference date Sample CAM Binding Protein
cam_bp 2013-01-01 00:00:00 CET Arabidopsis_stroma;Arabidopsis_membranes;
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 0.20723 0.49873 -