last update : january 2015

Public data retrieved in 2014



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AT4G17040 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT4G17040
Master Protein AT4G17040.1
Description (curated) ATP-dependent Clp protease proteolytic subunit, putative
Calculated MW (PPDB) 33.44
Calculated PI (PPDB) 9.33
Length 305
Curated Annotation
Description (curated) ClpR4 (nClpP9) ATP-dependent Clp protease proteolytic subunit, chloroplast precursor /
Function (curated) chaperone and protease
Localization (curated) Ch/S & Ch/E
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
SALPSSTIMIK 1,178.62166 0.34 68.9 11
GSQDRGVVSDLKK 1,387.74188 0.18 41.8 2
FQGQATDVEIAR 1,333.66258 0.29 90.7 28
GVVSDLKK 844.50177 0.19 41 4
YFSPTEAVEYGIIDK 1,730.84026 0.48 105.9 9
GSAHEQPPPDLASYLFK 1,855.91042 0.44 67.5 3
SALPSSTIMIK 1,162.62674 0.32 44.1 4
SPEQIEADMKRPK 1,559.76132 0.17 47.3 6
SALPSSTIMIKQPIAR 1,743.95528 0.32 88.7 3
FQGQATDVEIARK 1,461.75754 0.23 83.3 6
SPEQIEADMK 1,178.51250 0.20 69.7 12
SPEQIEADMK 1,162.51758 0.19 66.9 11
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 41.72 0 58.28 96 STR-ENV
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 0 1 -