last update : january 2015

Public data retrieved in 2014



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AT1G16720 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT1G16720
Master Protein AT1G16720.1
Description (curated) HCF173 (HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173); binding / catalytic/ oxidoreductase/ transcription repressor
Calculated MW (PPDB) 65.7
Calculated PI (PPDB) 9.14
Length 598
Curated Annotation
Description (curated) HCF173 High chlorophyll fluorescence phenotype protein 173 (HCF173), involved in translation of the D1 (PSBA) protein, chloroplast precursor /
Function (curated) chaperone and protease or translation PSII ?
Localization (curated) Ch/S
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
ALIFDQGNR 1,032.53520 0.31 58.7 6
FEFTETER 1,057.47160 0.31 23.1 1
RAGEDSLRR 1,058.55806 0.09 30.4 1
QRPVDGLAGAQQDLR 1,622.84882 0.28 55 2
LDDVNPVGLGR 1,153.60908 0.32 73.4 8
STITADLTR 976.51892 0.27 40.6 1
KQDEEVMSMLPR 1,525.67522 0.24 76.5 9
QGTYFQDTTASK 1,345.61499 0.26 64.5 1
SVDIVVGDVGEPSTLK 1,613.85115 0.39 100.8 7
FSGLGQMSR 1,013.45999 0.25 42.3 6
KLDVAPPSPQSPPSPPTLK 1,955.07275 0.33 30.6 1
KFSGLGQMSR 1,141.55495 0.20 33.5 2
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 0 0 100 44 STR
Reference of the experiment Reference date Sample CAM Binding Protein
cam_bp 2013-01-01 00:00:00 CET Arabidopsis_stroma;
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 0.21241 0.31944 -