last update : january 2015

Public data retrieved in 2014



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AT1G15980 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT1G15980
Master Protein AT1G15980.1
Description (curated) similar to unnamed protein product [Vitis vinifera] (GB:CAO49411.1); contains domain G3DSA:3.40.50.2000 (G3DSA:3.40.50.2000); contains domain SSF53756 (SSF53756)
Calculated MW (PPDB) 51.02
Calculated PI (PPDB) 6.49
Length 461
Curated Annotation
Description (curated) NDF1 (NDH48, PnsB1) PHOTOSYNTHETIC NDH SUBCOMPLEX B 1 (PnsB1), chloroplast precursor /
Function (curated) NDH
Localization (curated) Ch/Th
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
YYDMVLSTK 1,150.52161 0.31 38.1 1
GYTVELASLPLK 1,289.72305 0.45 67 2
TPLLPLR 808.51706 0.35 40.1 1
DKPCIGLFSSEEK 1,499.68132 0.38 53.4 2
GFKPVFVIPHEK 1,396.78664 0.35 33.9 2
GKQTYELNK 1,079.56108 0.17 44.2 3
LADIDIGTVK 1,043.58624 0.35 65.9 4
FIVIHGIESDSK 1,343.70847 0.33 46.8 1
GDADSLLSLEK 1,146.57680 0.38 46.6 1
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 0 100 0 17 THY
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 1.44751 0.00146 LAM_high