last update : january 2015

Public data retrieved in 2014



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AT4G04640 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT4G04640
Master Protein AT4G04640.1
Description (curated) ATPC1 (ATP synthase gamma chain 1)
Calculated MW (PPDB) 40.91
Calculated PI (PPDB) 8.13
Length 373
Curated Annotation
Description (curated) ATPC1 (ATPG1, CF1y) ATP synthase gamma chain 1, chloroplast precursor (EC 3.6.3.14) /
Function (curated) PS ATPase
Localization (curated) Ch/Th & Ch/E
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
YLEAGTLPTAK 1,162.62335 0.30 78.1 33
GNSYFLR 855.42386 0.30 42.6 8
RPYIPVDKYLEAGTLPTAK 2,131.16768 0.40 64.4 6
KGNSYFLR 983.51881 0.24 51.6 4
MSAMSSASDNASDLKK 1,689.71854 0.16 116.9 33
VALVVVTGDR 1,027.60254 0.34 99.9 90
SLSMVYNR 984.46983 0.24 40.1 3
GLCGGFNNFIIK 1,329.63864 0.53 80.8 8
MSAMSSASDNASDLKK 1,641.73378 0.19 69.7 4
SLSMVYNR 1,000.46475 0.25 48 14
GEICDINGTCVDAAEDEFFR 2,298.88919 0.60 64.3 2
MSAMSSASDNASDLKK 1,705.71346 0.16 129.3 105
KVALVVVTGDR 1,155.69750 0.27 100.6 11
DRIDSVK 831.44501 0.13 36.2 3
MSAMSSASDNASDLKK 1,673.72362 0.16 90.1 10
ITEAMKLVAAAK 1,276.70602 0.27 77.6 8
MSAMSSASDNASDLKK 1,657.72870 0.19 51.3 2
SEPVIHTLLPLSPK 1,529.88170 0.40 89.3 46
RAQEAVVNGRPFSETLVEVLYNINEQLQTDDVDVPLTK 4,299.20216 0.63 58.3 1
ALQESLASELAAR 1,357.72009 0.40 113.2 84
RAQEAVVNGR 1,098.58934 0.12 66.4 8
GLGLEYTVISVGKK 1,462.83945 0.38 65.4 7
AQEAVVNGR 942.48824 0.13 51.3 2
GLCGGFNNFIIKK 1,457.73360 0.44 58.1 5
MSAMSSASDNASDLK 1,561.62358 0.19 126.8 3
AQEAVVNGRPFSETLVEVLYNINEQLQTDDVDVPLTK 4,143.10106 0.67 55.8 1
GLGLEYTVISVGK 1,334.74449 0.43 93.6 32
MSAMSSASDNASDLK 1,577.61850 0.20 117.8 5
ITGEILEIVAGANAQV 1,596.87221 0.67 95.6 39
VALVVVTGDRGLCGGFNNFIIK 2,339.23062 0.53 63.1 1
RPYIPVDK 986.55489 0.22 54.3 6
PFSETLVEVLYNINEQLQTDDVDVPLTK 3,218.62338 0.70 30.4 1
EAQAVADDVFSLFISEEVDKVELLYTK 3,057.54330 0.67 92.3 11
LTVERETFR 1,149.61418 0.25 37.7 6
DRIDSVKNTQK 1,302.68915 0.12 31.7 1
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 16.79 81.22 1.99 588 THY-ENV
Reference of the experiment Reference date Sample CAM Binding Protein
cam_bp 2013-01-01 00:00:00 CET Arabidopsis_membranes;
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 2.39796 0 LAM_high