last update : january 2015
Public data retrieved in 2014
AT3G63140 protein group
|
Protein AT3G63140
|
| Master Protein |
AT3G63140.1 |
| Description (curated) |
mRNA-binding protein, putative |
| Calculated MW (PPDB) |
43.93 |
| Calculated PI (PPDB) |
8.54 |
| Length |
406 |
|
|
Curated Annotation
|
| Description (curated) |
RAP41 (CSP41A) mRNA binding protein, chloroplast precursor / |
| Function (curated) |
RNA Binding |
| Localization (curated) |
Ch/S & Ch/Th & Ch/E |
| Localization (validated) |
Yes
|
| References |
|
| Curated Protein Name |
|
| Publication (PPDB) |
|
|
|
Peptides
|
| Sequence |
Monoisotopic mass |
Retention Time |
Score |
Observed MS/MS count |
| DLLGWESK |
946.47597 |
0.41 |
41.9 |
2 |
| AVTLDGMAK |
904.46876 |
0.26 |
34.4 |
1 |
| TNLPEDLK |
928.48654 |
0.27 |
32.7 |
2 |
| YLAETFGNWASFR |
1,560.73607 |
0.51 |
74.6 |
5 |
| STEQPPHVEGDAVK |
1,492.71574 |
0.20 |
77.7 |
31 |
| FELDDKILEALK |
1,432.78130 |
0.48 |
89.1 |
4 |
| FSEIVSGGGK |
979.49739 |
0.24 |
63 |
33 |
| TVEIVHYDPK |
1,199.61861 |
0.27 |
64.3 |
11 |
| QFLFISSAGIYK |
1,372.73903 |
0.48 |
82.8 |
8 |
| PQYMIGSGNNK |
1,223.56042 |
0.21 |
46.1 |
2 |
| STEQPPHVEGDAVKADAGHVVVEK |
2,498.24004 |
0.26 |
45.2 |
1 |
| EIKFELDDKILEALK |
1,803.00290 |
0.48 |
110.4 |
8 |
| AVTLDGMAK |
936.45860 |
0.21 |
49.6 |
8 |
| NMHFYAEPR |
1,195.50801 |
0.23 |
53.3 |
14 |
| AVPIPGSGLQLTNISHVR |
1,858.04242 |
0.40 |
121.6 |
50 |
| DLDTVRPVVDWAK |
1,512.79361 |
0.40 |
53 |
10 |
| EIKFELDDK |
1,135.57606 |
0.32 |
43 |
4 |
| TNLPEDLKER |
1,213.63023 |
0.24 |
78.5 |
28 |
| ADAGHVVVEK |
1,023.53485 |
0.14 |
75.9 |
65 |
| AVTLDGMAK |
920.46368 |
0.19 |
37.3 |
1 |
| NMHFYAEPR |
1,179.51309 |
0.23 |
31 |
2 |
| Reference of the experiment |
Reference date |
score % of enveloppe |
score % of thylakoïd |
score % of stroma |
Total spectral count |
Localization Score |
| at_chloro_v1 |
2010 06 |
20.99 |
25.25 |
53.76 |
275 |
STR-THY |
| Reference of the experiment |
Reference date |
Log Fold Change |
pValue |
Curated Protein Complex Classes |
Differentially distributed proteins high or medium |
| thylakoïd_sub_compartments |
2013-10-01 00:00:00 CEST |
-0.96624 |
0.00995 |
|
BBY_medium |