last update : january 2015

Public data retrieved in 2014



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AT3G62030 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT3G62030
Master Protein AT3G62030.1
Description (curated) ROC4 (ROTAMASE CYP 4); peptidyl-prolyl cis-trans isomerase
Calculated MW (PPDB) 28.2
Calculated PI (PPDB) 8.83
Length 260
Curated Annotation
Description (curated) CP20C (ROC4) peptidyl-prolyl cis-trans isomerase, chloroplast precursor (EC 5.2.1.8) /
Function (curated) chaperone and protease
Localization (curated) Ch/S & Ch/E
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
TSWLDNK 862.41847 0.28 44.6 7
IIKDFMIQGGDFTEGNGTGGISIYGAK 2,788.37405 0.50 86.1 3
IIKDFMIQGGDFTEGNGTGGISIYGAK 2,820.36389 0.44 96.2 2
FEDENFTLK 1,141.52911 0.35 62.8 52
IVMGLFGEVVPK 1,319.71584 0.45 102.9 73
IVMGLFGEVVPK 1,287.72600 0.52 86.7 6
HTGPGILSMANAGPNTNGSQFFICTVK 2,761.33151 0.51 99.5 2
IVMGLFGEVVPK 1,303.72092 0.44 88.7 35
TLESQETR 962.46687 0.16 60.2 28
AFDVPKKGCR 1,167.57059 0.19 47.1 5
AFDVPKK 803.45410 0.20 26.3 1
IYACGELPLDA 1,211.53796 0.53 33.7 1
ALCTGEKK 896.42729 0.10 46.1 14
HVVFGQVIEGMK 1,358.70158 0.30 55.9 13
TSWLDNKHVVFGQVIEGMK 2,187.11458 0.48 71.2 3
HVVFGQVIEGMK 1,342.70666 0.35 90.3 4
VYFDVEIGGEVAGR 1,509.74626 0.66 62.3 4
HVVFGQVIEGMK 1,374.69650 0.31 86.1 36
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 22 0 78 280 STR-ENV
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 0 1 -