last update : january 2015
Public data retrieved in 2014
AT3G62030 protein group
|
Protein AT3G62030
|
| Master Protein |
AT3G62030.1 |
| Description (curated) |
ROC4 (ROTAMASE CYP 4); peptidyl-prolyl cis-trans isomerase |
| Calculated MW (PPDB) |
28.2 |
| Calculated PI (PPDB) |
8.83 |
| Length |
260 |
|
|
Curated Annotation
|
| Description (curated) |
CP20C (ROC4) peptidyl-prolyl cis-trans isomerase, chloroplast precursor (EC 5.2.1.8) / |
| Function (curated) |
chaperone and protease |
| Localization (curated) |
Ch/S & Ch/E |
| Localization (validated) |
Yes
|
| References |
|
| Curated Protein Name |
|
| Publication (PPDB) |
|
|
|
Peptides
|
| Sequence |
Monoisotopic mass |
Retention Time |
Score |
Observed MS/MS count |
| FEDENFTLK |
1,141.52911 |
0.35 |
62.8 |
52 |
| ALCTGEKK |
896.42729 |
0.10 |
46.1 |
14 |
| TSWLDNKHVVFGQVIEGMK |
2,187.11458 |
0.48 |
71.2 |
3 |
| IVMGLFGEVVPK |
1,303.72092 |
0.44 |
88.7 |
35 |
| IVMGLFGEVVPK |
1,287.72600 |
0.52 |
86.7 |
6 |
| TLESQETR |
962.46687 |
0.16 |
60.2 |
28 |
| HTGPGILSMANAGPNTNGSQFFICTVK |
2,761.33151 |
0.51 |
99.5 |
2 |
| IIKDFMIQGGDFTEGNGTGGISIYGAK |
2,820.36389 |
0.44 |
96.2 |
2 |
| AFDVPKK |
803.45410 |
0.20 |
26.3 |
1 |
| IVMGLFGEVVPK |
1,319.71584 |
0.45 |
102.9 |
73 |
| AFDVPKKGCR |
1,167.57059 |
0.19 |
47.1 |
5 |
| HVVFGQVIEGMK |
1,342.70666 |
0.35 |
90.3 |
4 |
| IYACGELPLDA |
1,211.53796 |
0.53 |
33.7 |
1 |
| HVVFGQVIEGMK |
1,374.69650 |
0.31 |
86.1 |
36 |
| VYFDVEIGGEVAGR |
1,509.74626 |
0.66 |
62.3 |
4 |
| TSWLDNK |
862.41847 |
0.28 |
44.6 |
7 |
| IIKDFMIQGGDFTEGNGTGGISIYGAK |
2,788.37405 |
0.50 |
86.1 |
3 |
| HVVFGQVIEGMK |
1,358.70158 |
0.30 |
55.9 |
13 |
| Reference of the experiment |
Reference date |
score % of enveloppe |
score % of thylakoïd |
score % of stroma |
Total spectral count |
Localization Score |
| at_chloro_v1 |
2010 06 |
22 |
0 |
78 |
280 |
STR-ENV |
| Reference of the experiment |
Reference date |
Log Fold Change |
pValue |
Curated Protein Complex Classes |
Differentially distributed proteins high or medium |
| thylakoïd_sub_compartments |
2013-10-01 00:00:00 CEST |
0 |
1 |
|
- |