last update : january 2015

Public data retrieved in 2014



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AT3G53580 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT3G53580
Master Protein AT3G53580.1
Description (curated) diaminopimelate epimerase family protein
Calculated MW (PPDB) 38.98
Calculated PI (PPDB) 5.45
Length 362
Curated Annotation
Description (curated) DAPF Diaminopimelate epimerase, chloroplastic
Function (curated) metabolism aa Asp
Localization (curated) Ch/S
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
FIAELENLQGK 1,260.67134 0.39 86.7 15
VDDLNLPEIGPK 1,308.69249 0.40 60.4 3
VDMGTPILK 1,004.52121 0.27 42.6 6
VDMGTPILK 988.52629 0.29 44.5 1
AQDVPTK 757.39700 0.12 41.6 2
IFNSDGSEPEMCGNGVR 1,890.73593 0.32 50.5 1
TNTEFVEVLSR 1,293.65643 0.39 86.4 4
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 0 0 100 32 STR
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 0 1 -