last update : january 2015

Public data retrieved in 2014



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AT3G53460 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT3G53460
Master Protein AT3G53460.1
Description (curated) CP29 (chloroplast 29 kDa ribonucleoprotein); RNA binding / poly(U) binding
Calculated MW (PPDB) 36
Calculated PI (PPDB) 5.24
Length 342
Curated Annotation
Description (curated) CP29 (ROC2, CP29 A') putative RNA-binding protein, chloroplast precursor /
Function (curated) RNA Binding
Localization (curated) Ch/Th & Ch/S
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
VNAGPPPPKR 1,031.58757 0.12 63.5 19
VNAGPPPPKREESFSR 1,766.90631 0.19 44.1 4
GGGYGSER 781.33542 0.09 34 1
NSFSPDLK 906.44467 0.27 42.1 2
VNAGPPPPK 875.48646 0.14 61.5 22
VSEAEARPPR 1,110.57812 0.16 51.8 50
REESFSR 909.43040 0.14 45.6 2
SKGFGFVTLSSSQEVQK 1,827.93660 0.35 123.1 3
VIYDRDSGR 1,079.53593 0.16 44.9 16
VSEAEARPPRGQF 1,442.72656 0.25 29.3 1
GFGFVTLSSSQEVQK 1,612.80962 0.41 95.5 4
AINSLNGADLDGR 1,314.65274 0.31 101 11
SSYGSGSGSGSGSGSGNR 1,546.62431 0.10 71.3 3
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 6.5 56.26 37.25 125 THY-STR
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 0 1 -