last update : january 2015

Public data retrieved in 2014



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AT1G02560 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT1G02560
Master Protein AT1G02560.1
Description (curated) CLPP5 (NUCLEAR ENCODED CLP PROTEASE 1); endopeptidase Clp
Calculated MW (PPDB) 32.35
Calculated PI (PPDB) 8.34
Length 298
Curated Annotation
Description (curated) ClpP5 (nClpP1) ATP-dependent Clp protease proteolytic subunit, chloroplast precursor /
Function (curated) chaperone and protease
Localization (curated) Ch/S & Ch/E
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
EYGLIDGVIMNPLK 1,576.81702 0.49 68.7 8
EAKEYGLIDGVIMNPLK 1,920.98659 0.44 42.2 1
EYGLIDGVIMNPLK 1,592.81194 0.49 80.9 5
FQSIISQLFQYR 1,528.80377 0.58 85 21
EYGLIDGVIMNPLK 1,560.82210 0.52 63.1 1
INQDTDR 860.39880 0.11 30.2 1
INQDTDRDFFMSAK 1,718.75697 0.31 89.5 31
INQDTDRDFFMSAK 1,702.76205 0.31 59.3 5
DFFMSAK 860.37381 0.33 30.8 2
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 42.22 0 57.78 69 STR-ENV
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 0 1 -