last update : january 2015
Public data retrieved in 2014
AT3G48870 protein group
|
Protein AT3G48870
|
| Master Protein |
AT3G48870.1 |
| Description (curated) |
ATCLPC (CASEINOLYTIC PROTEASE C); ATP binding / ATPase |
| Calculated MW (PPDB) |
105.77 |
| Calculated PI (PPDB) |
6.06 |
| Length |
952 |
|
|
Curated Annotation
|
| Description (curated) |
ClpC2 (Hsp93-III) ATP-dependent Clp protease ATP-binding subunit / |
| Function (curated) |
chaperone and protease |
| Localization (curated) |
Ch/E & Ch/S |
| Localization (validated) |
Yes
|
| References |
|
| Curated Protein Name |
|
| Publication (PPDB) |
|
|
|
Peptides
|
| Sequence |
Monoisotopic mass |
Retention Time |
Score |
Observed MS/MS count |
| TVDFKNTLLIMTSNVGSSVIEK |
2,395.26678 |
0.57 |
40.9 |
1 |
| VLENLGADPSNIR |
1,396.73099 |
0.33 |
90 |
153 |
| HIEKDPALER |
1,206.63565 |
0.17 |
62.1 |
38 |
| VGGFAAEEAMEDPIPIL |
1,789.84434 |
0.59 |
32.6 |
2 |
| VPEPTVEEAIQILQGLR |
1,891.04141 |
0.64 |
103.9 |
1 |
| ALAAYYFGSEEAMIR |
1,722.79225 |
0.44 |
76.6 |
10 |
| LGHNFVGTEQILLGLIGEGTGIAAK |
2,507.37465 |
0.60 |
105.6 |
29 |
| LDMSEFMER |
1,188.47908 |
0.27 |
50.5 |
20 |
| MPTLEEYGTNLTK |
1,527.71265 |
0.37 |
100.4 |
59 |
| RLGHNFVGTEQILLGLIGEGTGIAAK |
2,663.47575 |
0.54 |
44.2 |
3 |
| YRGEFEER |
1,084.49371 |
0.19 |
42 |
24 |
| QLTKLEVK |
957.58585 |
0.22 |
29 |
1 |
| IASGDVPETIEGK |
1,314.66666 |
0.29 |
86.1 |
85 |
| LIGSPPGYVGYTEGGQLTEAVR |
2,263.14836 |
0.43 |
136.4 |
34 |
| VIMLSQEEAR |
1,206.59140 |
0.27 |
59.8 |
4 |
| LDEMIVFR |
1,053.51645 |
0.38 |
56.1 |
43 |
| RVLELSLEEAR |
1,313.73026 |
0.33 |
60 |
12 |
| QYFRPEFLNR |
1,368.69382 |
0.36 |
32 |
8 |
| EKNEAVR |
844.44023 |
0.05 |
37 |
2 |
| NPNRPIASFIFSGPTGVGK |
1,958.03731 |
0.43 |
112.1 |
74 |
| QSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALAR |
3,815.04677 |
0.74 |
81.1 |
5 |
| LAEEGKLDPVVGR |
1,381.75645 |
0.27 |
90.5 |
86 |
| GELQCIGATTIDEYRK |
1,843.86214 |
0.42 |
82.2 |
28 |
| AHPDVFNMMLQILEDGR |
2,016.93968 |
0.45 |
85.7 |
11 |
| VLELSLEEAR |
1,157.62915 |
0.38 |
100.3 |
113 |
| AHPDVFNMMLQILEDGR |
2,048.92952 |
0.50 |
102.7 |
9 |
| TAIAEGLAQR |
1,028.56142 |
0.26 |
81.3 |
134 |
| TKNNPCLIGEPGVGK |
1,573.77693 |
0.28 |
79.3 |
13 |
| EGEGVAAR |
787.38237 |
0.11 |
51.5 |
25 |
| LDMSEFMER |
1,156.48924 |
0.43 |
43 |
1 |
| TVITLDMGLLVAGTK |
1,562.85890 |
0.48 |
49.5 |
1 |
| NTLLIMTSNVGSSVIEK |
1,836.95023 |
0.41 |
130.9 |
51 |
| SLVTEELK |
917.50693 |
0.31 |
40.7 |
15 |
| FLPDKAIDLIDEAGSR |
1,758.91516 |
0.45 |
98.4 |
30 |
| LAEEGKLDPVVGRQPQIER |
2,133.15413 |
0.28 |
49.2 |
5 |
| MVGENNEVTASVGGGSSGNSK |
2,011.87517 |
0.24 |
169.4 |
10 |
| AHPDVFNMMLQILEDGR |
2,032.93460 |
0.46 |
73.4 |
3 |
| LLEDSMAEK |
1,066.48521 |
0.20 |
61.6 |
54 |
| NTLLIMTSNVGSSVIEK |
1,820.95531 |
0.40 |
142.3 |
20 |
| LDEMIVFR |
1,021.52661 |
0.43 |
62.2 |
2 |
| LDEMIVFR |
1,037.52153 |
0.36 |
67.8 |
15 |
| GSGFVAVEIPFTPR |
1,475.77719 |
0.48 |
85.4 |
71 |
| NNPCLIGEPGVGK |
1,344.63429 |
0.33 |
78.4 |
10 |
| TVITLDMGLLVAGTK |
1,546.86398 |
0.46 |
49.2 |
2 |
| AIDLIDEAGSR |
1,158.58803 |
0.35 |
106.4 |
118 |
| LDMSEFMER |
1,220.46892 |
0.31 |
57.5 |
49 |
| KLMEEIR |
949.49023 |
0.18 |
46.8 |
12 |
| SMGINLK |
793.40036 |
0.23 |
51.6 |
10 |
| MPTLEEYGTNLTK |
1,511.71773 |
0.36 |
88.4 |
22 |
| GELQCIGATTIDEYR |
1,715.76718 |
0.49 |
40 |
2 |
| SLVTEELKQYFRPEFLNR |
2,268.19019 |
0.49 |
34 |
1 |
| VGGFAAEEAMEDPIPIL |
1,773.84943 |
0.57 |
58 |
2 |
| HAQLPEEAR |
1,049.52538 |
0.18 |
51.6 |
4 |
| LDMSEFMER |
1,172.48416 |
0.38 |
24.7 |
1 |
| SMGINLK |
777.40544 |
0.21 |
33.5 |
1 |
| LLEDSMAEK |
1,050.49030 |
0.19 |
59.5 |
22 |
| LDPVVGR |
754.43370 |
0.23 |
51.7 |
6 |
| VEVEKIIGR |
1,041.61818 |
0.27 |
61.7 |
5 |
| VIGQDEAVK |
957.51306 |
0.19 |
35.4 |
2 |
| LLQMEQTLHTR |
1,400.70819 |
0.23 |
58.1 |
3 |
| AEIANVLSR |
971.53995 |
0.31 |
33.7 |
2 |
| ALAAYYFGSEEAMIR |
1,706.79733 |
0.44 |
93.1 |
11 |
| QLGHNYIGSEHLLLGLLR |
2,032.12172 |
0.46 |
78.2 |
13 |
| VVDEGFDPSYGAR |
1,410.64150 |
0.32 |
44.9 |
2 |
| EIELQVTER |
1,115.58221 |
0.31 |
71.9 |
62 |
| LDMSEFMER |
1,204.47400 |
0.29 |
69.5 |
26 |
| NTLLIMTSNVGSSVIEK |
1,804.96039 |
0.45 |
66.6 |
1 |
| VIMLSQEEAR |
1,190.59648 |
0.26 |
47.4 |
1 |
| MVGENNEVTASVGGGSSGNSK |
1,995.88025 |
0.23 |
154.5 |
2 |
| Reference of the experiment |
Reference date |
score % of enveloppe |
score % of thylakoïd |
score % of stroma |
Total spectral count |
Localization Score |
| at_chloro_v1 |
2010 06 |
62.45 |
4.9 |
32.65 |
1,629 |
ENV-STR |
| Reference of the experiment |
Reference date |
Log Fold Change |
pValue |
Curated Protein Complex Classes |
Differentially distributed proteins high or medium |
| thylakoïd_sub_compartments |
2013-10-01 00:00:00 CEST |
0.89346 |
0.00476 |
|
LAM_medium |