last update : january 2015
Public data retrieved in 2014
AT3G20390 protein group
|
Protein AT3G20390
|
| Master Protein |
AT3G20390.1 |
| Description (curated) |
endoribonuclease L-PSP family protein |
| Calculated MW (PPDB) |
19.81 |
| Calculated PI (PPDB) |
8.52 |
| Length |
187 |
|
|
Curated Annotation
|
| Description (curated) |
L-PSP-like endoribonuclease L-PSP family protein / |
| Function (curated) |
RNA metabolism? |
| Localization (curated) |
Ch/E & Ch/S |
| Localization (validated) |
Yes
|
| References |
|
| Curated Protein Name |
|
| Publication (PPDB) |
|
|
|
Peptides
|
| Sequence |
Monoisotopic mass |
Retention Time |
Score |
Observed MS/MS count |
| TTIMLADLADFK |
1,337.69006 |
0.51 |
54.3 |
1 |
| APAALGPYSQAIK |
1,285.70299 |
0.34 |
57.8 |
3 |
| NMGEILK |
819.41600 |
0.19 |
39.7 |
1 |
| EVVSTEK |
790.40721 |
0.11 |
23.6 |
1 |
| FVSESVEDQTEQVLK |
1,736.84680 |
0.38 |
129.4 |
11 |
| STYQVAALPLNAK |
1,374.75067 |
0.37 |
68.7 |
8 |
| ASGADYSSVVK |
1,082.52435 |
0.23 |
77.5 |
10 |
| TTIMLADLADFK |
1,369.67990 |
0.50 |
85.3 |
4 |
| YFPAPSPAR |
1,004.50794 |
0.27 |
30.5 |
1 |
| TVNEIYAK |
936.49161 |
0.21 |
39.4 |
1 |
| ANNLVFLSGVLGLIPETGK |
1,941.09341 |
0.64 |
97.5 |
2 |
| Reference of the experiment |
Reference date |
score % of enveloppe |
score % of thylakoïd |
score % of stroma |
Total spectral count |
Localization Score |
| at_chloro_v1 |
2010 06 |
57.81 |
0 |
42.19 |
42 |
ENV-STR |
| Reference of the experiment |
Reference date |
Log Fold Change |
pValue |
Curated Protein Complex Classes |
Differentially distributed proteins high or medium |
| thylakoïd_sub_compartments |
2013-10-01 00:00:00 CEST |
0 |
1 |
|
- |