last update : january 2015

Public data retrieved in 2014



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AT3G12780 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT3G12780
Master Protein AT3G12780.1
Description (curated) PGK1 (PHOSPHOGLYCERATE KINASE 1); phosphoglycerate kinase
Calculated MW (PPDB) 50.11
Calculated PI (PPDB) 5.91
Length 481
Curated Annotation
Description (curated) PGK1 (PGKH) phosphoglycerate kinase 1, chloroplast precursor (EC 2.7.2.3) /
Function (curated) metabolism carbon Calvin cycle
Localization (curated) Ch/S
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
ADLNVPLDDNQTITDDTRIR 2,284.12950 0.38 63 5
VILSTHLGRPK 1,219.74005 0.23 68.4 95
ADLNVPLDDNQTITDDTR 2,014.94434 0.38 129.6 172
LASLADLYVNDAFGTAHR 1,932.96932 0.47 148.7 71
IVPASGIEDGWMGLDIGPDSIK 2,301.11980 0.51 107.7 13
GVSLLLPTDVVVADK 1,524.87625 0.48 98.9 100
FYKEEEK 971.45996 0.16 42.4 6
PFAAIVGGSK 945.52830 0.30 37.9 1
GVTTIIGGGDSVAAVEK 1,572.83582 0.39 134.7 208
VILSTHLGR 994.59233 0.26 73.1 49
AAIPTIK 712.44830 0.27 34.3 17
IVPASGIEDGWMGLDIGPDSIK 2,285.12488 0.52 114.7 31
AHASTEGVTK 999.49849 0.11 65.9 65
YLIENGAK 906.48103 0.24 37.6 4
VGVAGVMSHISTGGGASLELLEGK 2,300.16809 0.53 144 60
CDILLLGGGMIFTFYK 1,853.89427 0.69 76.6 5
FSLAPLVPRLSELLGIEVTK 2,181.27721 0.67 36.7 1
TFNEALDTTQTVIWNGPMGVFEMEK 2,857.33018 0.62 95.5 3
AKGVSLLLPTDVVVADKFAPDANSK 2,554.40056 0.44 101.4 15
IGVIESLLEKCDILLLGGGMIFTFYK 2,935.53253 0.72 81.1 2
SVGDLTSADLK 1,104.56624 0.30 96.5 126
FSLAPLVPR 998.59126 0.44 73.1 221
TFNEALDTTQTVIWNGPMGVFEMEK 2,889.32002 0.54 109.2 7
PSVAGFLLQK 1,058.61238 0.42 83.2 14
FAAGTEAIANKLAELSEK 1,861.97846 0.45 122.1 7
AQGLSVGSSLVEEDKLELATELLAK 2,599.39552 0.60 132.8 141
ADDCIGPEVESLVASLPEGGVLLLENVR 2,893.47417 0.76 31.4 1
IGVIESLLEK 1,099.64882 0.47 83.4 72
SVGDLTSADLKGKK 1,417.77760 0.22 94.6 9
IVPASGIEDGWMGLDIGPDSIK 2,269.12996 0.55 103 4
ELDYLVGAVSNPK 1,403.72958 0.40 101.2 124
LAELSEKGVTTIIGGGDSVAAVEK 2,343.25320 0.41 152 8
EEEKNDPEFAK 1,334.59897 0.18 66 23
EEEKNDPEFAKK 1,462.69392 0.14 35.5 4
TFNEALDTTQTVIWNGPMGVFEMEK 2,921.30986 0.55 58.9 1
FLKPSVAGFLLQK 1,446.85980 0.43 97.6 113
AQGLSVGSSLVEEDK 1,517.75725 0.34 60.5 2
LSELLGIEVTK 1,200.69650 0.43 106 59
VGVAGVMSHISTGGGASLELLEGK 2,268.17825 0.50 102.4 3
LELATELLAK 1,099.64883 0.44 52.9 6
FAAGTEAIANK 1,091.56107 0.24 99.2 248
RPFAAIVGGSK 1,101.62941 0.27 85.1 257
FAPDANSK 848.40280 0.15 47.7 6
GVSLLLPTDVVVADKFAPDANSK 2,355.26849 0.49 116.2 29
NDPEFAK 819.37625 0.20 29.7 3
FYKEEEKNDPEFAK 1,772.82565 0.23 95.5 110
SVGDLTSADLKGK 1,289.68265 0.25 93.5 23
KLASLADLYVNDAFGTAHR 2,061.06427 0.43 150.4 31
TFNEALDTTQTVIWNGPMGVFEMEK 2,905.31494 0.55 88.7 2
VGVAGVMSHISTGGGASLELLEGK 2,284.17317 0.41 109.2 8
LAELSEK 788.42795 0.20 60.9 27
AAIPTIKYLIENGAK 1,600.91878 0.47 47.6 3
VLPGVIALDEAIPVTV 1,604.93884 0.63 98.1 128
TFNEALDTTQTVIWNGPMGVFEMEK 2,873.32510 0.59 100.7 2
AKGVSLLLPTDVVVADK 1,724.00832 0.41 95.3 8
KSVGDLTSADLK 1,232.66119 0.26 80.9 14
FLKPSVAGFLLQKELDYLVGAVSNPK 2,832.57883 0.65 76.3 8
ADDCIGPEVESLVASLPEGGVLLLENVR 2,941.45891 0.80 66.8 8
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 7.44 2.78 89.79 2,675 STR
Reference of the experiment Reference date Sample CAM Binding Protein
cam_bp 2013-01-01 00:00:00 CET Arabidopsis_stroma;
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 3.49572 0 LAM_high