last update : january 2015

Public data retrieved in 2014



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AT3G04790 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT3G04790
Master Protein AT3G04790.1
Description (curated) ribose 5-phosphate isomerase-related
Calculated MW (PPDB) 29.3
Calculated PI (PPDB) 5.72
Length 276
Curated Annotation
Description (curated) PRI ribose 5-phosphate isomerase-related, EMBRYO DEFECTIVE 3119, chloroplast precursor /
Function (curated) metabolism carbon Calvin cycle
Localization (curated) Ch/S
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
TPSIALR 756.44937 0.28 33 1
EKMVEAVADKFIVVADDTK 2,139.07686 0.39 120.8 10
TPLKDGFAAAK 1,117.61311 0.24 68.8 20
IDLAIDGADEVDPNLDLVK 2,024.03131 0.50 115.4 45
AVEAIKPGMVLGLGTGSTAAFAVDQIGK 2,732.44174 0.47 95.8 17
LLSSGELYDIVGIPTSKR 1,947.06763 0.45 50.8 5
MVEAVADKFIVVADDTK 1,849.94948 0.45 86.2 4
FIVVADDTK 1,006.53348 0.30 56.7 21
IDLAIDGADEVDPNLDLVKGR 2,237.15387 0.44 68.8 3
MVEAVADKFIVVADDTK 1,881.93932 0.39 128.5 21
MVEAVADK 893.41640 0.15 61.1 4
NGVEVMTK 892.43237 0.17 34 2
AVEAIKPGMVLGLGTGSTAAFAVDQIGK 2,716.44682 0.48 84.1 10
MVEAVADKFIVVADDTK 1,865.94440 0.38 79.8 2
FQGVVEHGLFLGMATSVIIAGK 2,305.21393 0.49 82.9 2
AVEAIKPGMVLGLGTGSTAAFAVDQIGK 2,700.45190 0.52 107.9 3
SLGIPLVGLDTHPR 1,473.83032 0.42 76 50
LLSSGELYDIVGIPTSK 1,790.96652 0.51 106.4 67
NGVEVMTK 908.42729 0.15 55.6 10
EKMVEAVADK 1,150.55394 0.14 50.8 8
AQSVALSQDDLK 1,273.65137 0.28 63.9 4
RTEEQAR 888.44132 0.04 49.4 1
MVEAVADK 877.42148 0.16 46.7 5
VDGDGKPYVTDNSNYIIDLYFK 2,535.21686 0.52 62.8 2
EFGCESKLR 1,115.49167 0.24 31 1
DGFAAAK 678.33365 0.17 66.6 9
AQSVALSQDDLKK 1,401.74632 0.23 71.6 8
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 4.29 0 95.71 319 STR
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 1.83093 0.00002 LAM_high