last update : january 2015

Public data retrieved in 2014



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AT1G10510 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT1G10510
Master Protein AT1G10510.1
Description (curated) EMB2004 (EMBRYO DEFECTIVE 2004); protein binding
Calculated MW (PPDB) 64.72
Calculated PI (PPDB) 7.18
Length 605
Curated Annotation
Description (curated) HP73 (EMB2004) similar to ribonuclease inhibitor, EMBRYO DEFECTIVE 2004, contains Leucine Rich Repeat domains, chloroplast precursor /
Function (curated) RNA metabolism?
Localization (curated) Ch/E/IM
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
ESQAASGFPNAK 1,205.56761 0.21 79.4 22
ANGLRDEGASCLAR 1,479.67354 0.26 91.4 2
ALMAGLSSHK 1,045.52260 0.18 48.8 9
AFDGVLQSNIMLK 1,466.74387 0.44 85.1 4
TSAGENNSSTQGVK 1,378.63240 0.11 92.5 6
ALSEILK 772.46942 0.31 44.1 3
ANEDVTVTSINLGNNFITK 2,049.03778 0.46 117.4 9
ILNLSGNPIGDEGAK 1,496.78340 0.38 124.5 22
DNAIITTLEVGYNPIGPDGAK 2,157.09529 0.53 100.7 4
DHVLEMTEK 1,132.50702 0.18 26.8 2
VVNEALTSVDLGFNEIR 1,874.97371 0.50 111.8 1
ELHLHGNSIGDEGTR 1,633.78079 0.23 79.5 2
AFDGVLQSNIMLK 1,450.74895 0.42 51 1
GAEHVADMLR 1,113.52365 0.20 44.6 3
VALLDLGNNSISAK 1,413.78268 0.42 100.2 21
GAEHVADMLR 1,129.51857 0.22 47.3 4
ALMAGLSSHK 1,029.52768 0.17 45.6 1
EIAELLK 814.47998 0.34 36 2
ALMAGLSSHK 1,013.53276 0.26 29 2
GAFYVAEYIK 1,159.59129 0.43 60 14
YNNTISVLDLR 1,306.68808 0.42 89.4 15
DDGAFAIAQALK 1,218.62440 0.46 93.1 6
FGQSALTDAR 1,064.52504 0.27 82.7 9
EIAELLKR 970.58108 0.29 55.6 1
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 100 0 0 150 ENV
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 1.97167 0.00003 LAM_high