last update : january 2015
Public data retrieved in 2014
AT1G09340 protein group
|
Protein AT1G09340
|
| Master Protein |
AT1G09340.1 |
| Description (curated) |
CRB; binding / catalytic/ coenzyme binding |
| Calculated MW (PPDB) |
42.62 |
| Calculated PI (PPDB) |
8.18 |
| Length |
378 |
|
|
Curated Annotation
|
| Description (curated) |
CRB (RAP38, CSP41B) putative RNA-binding protein, chloroplast precursor / |
| Function (curated) |
RNA Binding |
| Localization (curated) |
Ch/S ?? & Ch/Th ?? & Ch/E ?? |
| Localization (validated) |
Yes
|
| References |
|
| Curated Protein Name |
|
| Publication (PPDB) |
|
|
|
Peptides
|
| Sequence |
Monoisotopic mass |
Retention Time |
Score |
Observed MS/MS count |
| EGHQVTLFTR |
1,186.60944 |
0.27 |
55.3 |
29 |
| EADFTTDDMILSK |
1,516.66029 |
0.37 |
82.1 |
40 |
| ILHLKGDRK |
1,078.66107 |
0.13 |
36.8 |
3 |
| PIPVPNSGIQISQLGHVK |
1,883.06282 |
0.39 |
47.8 |
6 |
| DLATAFLNVLGNEK |
1,503.79324 |
0.61 |
129.9 |
89 |
| AGRPIPVPNSGIQISQLGHVK |
2,167.22249 |
0.35 |
104.4 |
27 |
| DQHFFASVEK |
1,206.56690 |
0.30 |
62.1 |
39 |
| AGGFPEPEIVHYNPK |
1,653.81503 |
0.35 |
82.1 |
37 |
| AFPFRDQHFFASVEK |
1,824.89468 |
0.38 |
72 |
4 |
| KDYDFVK |
913.45450 |
0.23 |
34.8 |
2 |
| ILHLKGDR |
950.56612 |
0.17 |
29.7 |
3 |
| GKLETESLLQSK |
1,331.72960 |
0.28 |
83 |
40 |
| ILIMGGTR |
875.48984 |
0.24 |
49.3 |
4 |
| GKSPIAK |
699.42789 |
0.09 |
46.8 |
12 |
| KEADFTTDDMILSKK |
1,772.85020 |
0.28 |
32.5 |
1 |
| PVYIYGPLNYNPVEEWFFHR |
2,539.23238 |
0.64 |
70.3 |
5 |
| HVLGWKPEFDLVEGLTDSYNLDFGR |
2,906.42381 |
0.59 |
109.3 |
8 |
| KILIMGGTR |
1,019.57971 |
0.20 |
62.7 |
15 |
| EAEEVEPILEALPK |
1,565.81879 |
0.47 |
91.2 |
39 |
| LETESLLQSK |
1,146.61319 |
0.31 |
86.8 |
38 |
| KEADFTTDDMILSK |
1,628.76033 |
0.31 |
70.8 |
2 |
| KEADFTTDDMILSK |
1,644.75525 |
0.32 |
124.1 |
27 |
| SDILPHCEEDAVDPK |
1,714.73556 |
0.32 |
73.9 |
34 |
| FIGLFLSR |
951.55414 |
0.47 |
66.1 |
41 |
| ILIMGGTR |
891.48476 |
0.24 |
59.6 |
27 |
| ILIMGGTR |
859.49492 |
0.29 |
35.7 |
1 |
| EADFTTDDMILSK |
1,500.66538 |
0.36 |
62.4 |
15 |
| EIFNISGEK |
1,035.52362 |
0.33 |
47.1 |
29 |
| EFDFGKK |
869.42827 |
0.23 |
29.4 |
1 |
| LEQYIYCSSAGVYLK |
1,783.83379 |
0.44 |
99.3 |
4 |
| YVTFDGLAK |
1,012.52290 |
0.36 |
40.9 |
11 |
| EADFTTDDMILSK |
1,484.67046 |
0.41 |
60.9 |
5 |
| SSLSAEGFDVVYDINGR |
1,827.86383 |
0.48 |
122.4 |
20 |
| QLPGESDQDFADFSSK |
1,769.77438 |
0.38 |
118.8 |
75 |
| Reference of the experiment |
Reference date |
score % of enveloppe |
score % of thylakoïd |
score % of stroma |
Total spectral count |
Localization Score |
| at_chloro_v1 |
2010 06 |
16.53 |
36.15 |
47.32 |
713 |
Mix |
| Reference of the experiment |
Reference date |
Log Fold Change |
pValue |
Curated Protein Complex Classes |
Differentially distributed proteins high or medium |
| thylakoïd_sub_compartments |
2013-10-01 00:00:00 CEST |
-0.52487 |
0.20243 |
|
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