last update : january 2015

Public data retrieved in 2014



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AT1G08550 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT1G08550
Master Protein AT1G08550.1
Description (curated) NPQ1 (NON-PHOTOCHEMICAL QUENCHING 1)
Calculated MW (PPDB) 52.01
Calculated PI (PPDB) 5.18
Length 462
Curated Annotation
Description (curated) NPQ1 (VDE) Violaxanthin Deepoxidase (VDE), NON-PHOTOCHEMICAL QUENCHING 1 (NPQ1), chloroplast precursor /
Function (curated) metabolism vitamin and pigment carotenoids
Localization (curated) Ch/Th
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
TLDSGFFTR 1,042.50833 0.38 49.6 6
LAEGFNELKQDEENFVR 2,036.98024 0.43 69.4 3
DFSTFIR 884.43919 0.41 28.9 2
TEMTLFQR 1,056.49098 0.31 42.2 4
SSVLPNSIIPELEK 1,524.83987 0.46 47.3 5
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 0 100 0 16 THY
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 1.42545 0.00001 LAM_high