last update : january 2015

Public data retrieved in 2014



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AT2G24020 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT2G24020
Master Protein AT2G24020.1
Description (curated) similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G30620.1); similar to unknown [Picea sitchensis] (GB:ABK26000.1); similar to Os02g0180200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046090.1); contains InterPro domain Conserved hypo
Calculated MW (PPDB) 19.81
Calculated PI (PPDB) 9.13
Length 182
Curated Annotation
Description (curated) YbaB-like conserved plant and cyanobacterial protein (YbaB family), similarity with protein slr1847 [Synechocystis sp], chloroplast precursor /
Function (curated) unknown
Localization (curated) Ch/S & Ch/E
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
AGIFGNMQNMYETVK 1,701.78538 0.50 53 1
AGIFGNMQNMYETVK 1,765.76506 0.37 89 6
SVVAMKER 950.48547 0.09 48.4 5
VTLSGNQQPIRTDITEAAMELGSEK 2,719.33337 0.44 88.2 2
KAQMVVQVEAVR 1,388.74452 0.23 78.9 9
TDITEAAMELGSEK 1,509.68681 0.38 69.8 3
AGIFGNMQNMYETVKK 1,893.86002 0.31 86 2
VTLSGNQQPIR 1,211.66220 0.24 96.3 30
MSDLAQSLGMPPGLSEGMK 2,027.88493 0.39 80.9 3
TDITEAAMELGSEK 1,493.69190 0.43 68.9 1
MSDLAQSLGMPPGLSEGMK 2,043.87985 0.40 146.4 16
AQMVVQVEAVR 1,244.65465 0.28 72 8
TDITEAAMELGSEK 1,525.68173 0.39 108.7 9
AQMVVQVEAVR 1,260.64957 0.28 103.3 15
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 21.65 0 78.35 109 STR-ENV
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 0.16667 0.48959 -