last update : january 2015

Public data retrieved in 2014

Home

AT2G20890 protein group

See also

Protein AT2G20890
Master Protein	AT2G20890.1
Description (curated)	PSB29 (THYLAKOID FORMATION1)
Calculated MW (PPDB)	33.79
Calculated PI (PPDB)	9.2
Length	300

Curated Annotation
Description (curated)	THF1 (TF1, PSB29) thylakoid formation1 protein, Photosystem II reaction center PSB29 protein, chloroplast precursor /
Function (curated)	vesicle formation
Localization (curated)	Ch/Th & Ch/E
Localization (validated)	Yes
References
Curated Protein Name
Publication (PPDB)	12938931 (Envelope) 16207701 (Stroma) 15322131 (Thylakoids) 14729914 (Thylakoids) 18431481 (Total Chloroplast)

Peptides
Sequence	Monoisotopic mass	Retention Time	Score	Observed MS/MS count
AYIEALNEDPK	1,261.61899	0.31	71.7	9
ANETISK	761.39191	0.09	60.1	13
AYIEALNEDPKQYR	1,708.84200	0.31	37	2
SQTSASLVDFSSK	1,355.65684	0.32	106.7	24
RPIPSIYNTVLQELIVQQHLMR	2,679.45299	0.52	72.5	1
SVDRDLDVYR	1,236.60983	0.27	42.3	3
ELLKEYVER	1,177.63423	0.28	42.3	3
SQTSASLVDFSSKEGDIEAVLKDIAGR	2,822.42969	0.55	109.6	2
ELLKEYVEREK	1,434.77177	0.26	31.1	1
IDAQKMEEWAR	1,375.65540	0.34	35.1	1
LLELASATDPTVLDK	1,584.86102	0.43	75.6	7
FFAVGLFR	955.52791	0.48	65.4	20
EGDIEAVLK	972.51273	0.33	41.9	5
EGDIEAVLKDIAGR	1,484.78340	0.49	76.6	16

Reference of the experiment	Reference date	score % of enveloppe	score % of thylakoïd	score % of stroma	Total spectral count	Localization Score
at_chloro_v1	2010 06	27.16	71.29	1.54	106	THY-ENV

Reference of the experiment	Reference date	Sample CAM Binding Protein
cam_bp	2013-01-01 00:00:00 CET	Arabidopsis_membranes;

Reference of the experiment	Reference date	Log Fold Change	pValue	Curated Protein Complex Classes	Differentially distributed proteins high or medium
thylakoïd_sub_compartments	2013-10-01 00:00:00 CEST	1.27061	0.0135		LAM_high