last update : january 2015

Public data retrieved in 2014



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AT2G20890 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT2G20890
Master Protein AT2G20890.1
Description (curated) PSB29 (THYLAKOID FORMATION1)
Calculated MW (PPDB) 33.79
Calculated PI (PPDB) 9.2
Length 300
Curated Annotation
Description (curated) THF1 (TF1, PSB29) thylakoid formation1 protein, Photosystem II reaction center PSB29 protein, chloroplast precursor /
Function (curated) vesicle formation
Localization (curated) Ch/Th & Ch/E
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
SQTSASLVDFSSK 1,355.65684 0.32 106.7 24
ELLKEYVEREK 1,434.77177 0.26 31.1 1
ANETISK 761.39191 0.09 60.1 13
EGDIEAVLK 972.51273 0.33 41.9 5
FFAVGLFR 955.52791 0.48 65.4 20
AYIEALNEDPK 1,261.61899 0.31 71.7 9
ELLKEYVER 1,177.63423 0.28 42.3 3
LLELASATDPTVLDK 1,584.86102 0.43 75.6 7
SQTSASLVDFSSKEGDIEAVLKDIAGR 2,822.42969 0.55 109.6 2
IDAQKMEEWAR 1,375.65540 0.34 35.1 1
EGDIEAVLKDIAGR 1,484.78340 0.49 76.6 16
SVDRDLDVYR 1,236.60983 0.27 42.3 3
RPIPSIYNTVLQELIVQQHLMR 2,679.45299 0.52 72.5 1
AYIEALNEDPKQYR 1,708.84200 0.31 37 2
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 27.16 71.29 1.54 106 THY-ENV
Reference of the experiment Reference date Sample CAM Binding Protein
cam_bp 2013-01-01 00:00:00 CET Arabidopsis_membranes;
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 1.27061 0.0135 LAM_high