last update : january 2015

Public data retrieved in 2014



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AT1G79560 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT1G79560
Master Protein AT1G79560.1
Description (curated) EMB1047/FTSH12 (EMBRYO DEFECTIVE 1047); ATP-dependent peptidase/ ATPase/ metallopeptidase
Calculated MW (PPDB) 115.1
Calculated PI (PPDB) 6.48
Length 1,008
Curated Annotation
Description (curated) FtsH12 (EMB1047) protease, chloroplast precursor /
Function (curated) chaperone and protease
Localization (curated) Ch/E/IM
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
LDSSEVAAVVFTEDLKR 1,877.97339 0.47 47.1 1
NLVNEAAIMSVR 1,347.68160 0.36 94.5 3
EKLSEQLNSSAAK 1,403.72557 0.20 69.9 2
ETAVSVFYPR 1,167.59238 0.38 54 8
LYIGLPDAK 988.55930 0.39 42.8 2
ESGLPFVFASGAEFTDSEK 2,016.93156 0.53 87.2 2
YVVEFDMKEVEK 1,530.72752 0.31 47.8 1
TEIGFDSEEASGR 1,396.61060 0.30 89.8 6
VSYQPVDLR 1,075.56618 0.31 52.2 4
ITGLEVEEK 1,016.53894 0.27 34.9 2
INEMFSIAR 1,111.53316 0.33 48.8 5
LPYTYFLQK 1,171.62772 0.44 47.3 5
NLAEDIDFGK 1,120.54001 0.39 51 6
NLVNEAAIMSVR 1,331.68668 0.35 96.3 2
EDMVDQGYTTFGYMK 1,847.72295 0.37 93.2 4
IGMVDLPDNPDGELIK 1,756.85527 0.43 74.8 5
GVLLSGPPGTGK 1,081.61310 0.30 57.8 8
VNEYVAR 849.43442 0.18 59.5 1
ESAMLLLITSK 1,220.66859 0.39 30.2 1
EMVISPQSAR 1,132.55463 0.20 31.9 2
EDMVDQGYTTFGYMK 1,815.73311 0.35 74.3 1
TVGFSGADIR 1,021.51921 0.31 60.1 5
INEMFSIAR 1,079.54332 0.39 42.9 1
SLREDVIGR 1,043.57231 0.25 42.1 4
VYVAIQAPR 1,015.58142 0.30 55.5 3
VQIFGVHSAGK 1,141.62433 0.28 44.1 5
SYIYQQDIVDVLDK 1,697.85118 0.50 93 1
INEMFSIAR 1,095.53824 0.32 77.1 3
EMVISPQSAR 1,148.54954 0.22 63.8 6
ATFEALIAQLDGEKEK 1,761.91481 0.50 78.8 3
IGMVDLPDNPDGELIK 1,740.86035 0.42 74.8 2
YIEETEELAMNALR 1,696.79774 0.44 76.9 2
YVVEFDMKEVEK 1,546.72244 0.33 46.6 1
LSEQLNSSAAK 1,146.58803 0.19 69.7 4
LGLTQLVK 870.55382 0.36 66 3
MQMVVAHGGR 1,132.51170 0.12 83.5 2
YIEETEELAMNALR 1,712.79266 0.44 105.4 2
HILDLITR 979.58145 0.36 35.4 1
EDMVDQGYTTFGYMK 1,831.72803 0.36 69.4 3
VVFGDNVTDGGKDDLEK 1,806.86350 0.31 97 5
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 100 0 0 122 ENV
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 1.02193 0.03518 LAM_high