last update : january 2015

Public data retrieved in 2014



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AT1G79040 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT1G79040
Master Protein AT1G79040.1
Description (curated) PSBR (photosystem II subunit R)
Calculated MW (PPDB) 14.58
Calculated PI (PPDB) 9.62
Length 140
Curated Annotation
Description (curated) PSBR Photosystem II 10 kDa polypeptide, chloroplast precursor /
Function (curated) PS PSII
Localization (curated) Ch/Th
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
IKTDKPFGINGSMDLR 1,806.92976 0.29 77.9 7
PFGINGSMDLR 1,237.57608 0.38 39.4 1
DGVDASGR 775.34601 0.10 48 27
GKGYGVYK 870.45988 0.18 27 1
YGANVDGYSPIYNENEWSASGDVYK 2,797.21426 0.45 77.3 2
TDKPFGINGSMDLRDGVDASGR 2,339.08112 0.33 42.7 1
IKTDKPFGINGSMDLR 1,822.92468 0.30 92.1 18
IKTDKPFGINGSMDLR 1,790.93484 0.34 37.3 1
TDKPFGINGSMDLR 1,581.74567 0.32 66.3 18
DGVDASGRK 903.44096 0.08 41.5 8
TDKPFGINGSMDLR 1,565.75075 0.30 54.1 15
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 4.94 95.06 0 91 THY
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 0.47159 0.29049 -