last update : january 2015

Public data retrieved in 2014



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AT1G78630 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT1G78630
Master Protein AT1G78630.1
Description (curated) EMB1473 (EMBRYO DEFECTIVE 1473); structural constituent of ribosome
Calculated MW (PPDB) 26.78
Calculated PI (PPDB) 9.93
Length 241
Curated Annotation
Description (curated) RPL13 (EMB1473) 50S ribosomal protein L13, chloroplast precursor /
Function (curated) translation stroma
Localization (curated) Ch/S & Ch/E
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
PGGMTVETFDQLQQR 1,737.79916 0.35 107.5 2
LASTIANHIR 1,094.61961 0.23 95.8 47
IVEHAVR 822.47115 0.12 51.6 14
VYKGPDHPHEAQKPLDLPIR 2,309.22800 0.25 57.3 1
GPDHPHEAQKPLDLPIR 1,919.00131 0.25 57.6 2
ALFNHLK 841.48099 0.25 37.6 3
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 39.75 6.38 53.87 62 STR-ENV
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 0.84258 0.0278 LAM_medium