last update : january 2015

Public data retrieved in 2014



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AT1G69740 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT1G69740
Master Protein AT1G69740.1
Description (curated) HEMB1; porphobilinogen synthase
Calculated MW (PPDB) 46.69
Calculated PI (PPDB) 6.95
Length 430
Curated Annotation
Description (curated) HEM2 (ALAD-1, ALADH) Delta-aminolevulinic acid dehydratase 1 (Porphobilinogen synthase 1), chloroplast precursor (EC 4.2.1.24) /
Function (curated) metabolism vitamin and pigment
Localization (curated) Ch/S
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
AVGVNSIVLFPKVPEALK 1,880.11342 0.50 19.2 1
EALIEAR 800.43918 0.24 32.2 1
EALDSNPR 900.43008 0.15 53.4 19
MIDEEKVMMESLMCLRR 2,288.93025 0.35 37.2 1
AGADVVSPSDMMDGR 1,538.63406 0.22 48.2 1
AGADVVSPSDMMDGR 1,554.62898 0.23 70.2 8
MIDEEKVMMESLMCLR 2,132.82915 0.41 94.8 1
DKSPLPIAAYQVSGEYSMIK 2,228.10342 0.42 116.9 4
AVGVNSIVLFPK 1,242.73354 0.43 86 43
EDGVIMNDETVHQLCK 1,893.80840 0.29 91.9 2
TYQMNPANYR 1,288.55061 0.24 34.4 1
EDEAEGADILLVKPGLPYLDIIR 2,538.35803 0.57 112.6 8
YASSFYGPFR 1,193.55051 0.39 82.6 7
EDGVIMNDETVHQLCK 1,909.80331 0.30 74.2 3
SPLPIAAYQVSGEYSMIK 1,968.98660 0.43 66.1 1
AGADVVSPSDMMDGR 1,506.64423 0.37 39.3 2
HGLVQEVAK 979.54503 0.20 65 12
NSTGDEAYNDNGLVPR 1,720.76520 0.31 78.7 12
QAVSQAR 758.40347 0.05 56.8 5
SPLPIAAYQVSGEYSMIK 1,984.98152 0.44 117 2
TYQMNPANYR 1,256.56078 0.28 36.4 1
DKSPLPIAAYQVSGEYSMIK 2,212.10850 0.41 68.3 2
AGADVVSPSDMMDGR 1,570.62390 0.23 62.3 33
SALDAEGFQNVSIMSYTAK 2,030.96184 0.49 99.6 1
SALDAEGFQNVSIMSYTAK 2,062.95168 0.43 87.7 1
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 6.92 0 93.08 164 STR
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 0.16667 0.48959 -