last update : january 2015

Public data retrieved in 2014



Home

AT1G65260 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT1G65260
Master Protein AT1G65260.1
Description (curated) PTAC4 (PLASTID TRANSCRIPTIONALLY ACTIVE4)
Calculated MW (PPDB) 36.39
Calculated PI (PPDB) 9.17
Length 330
Curated Annotation
Description (curated) Vipp1 (IM30, PspA, HCF155, PTAC4) Plastid Transcriptionally Active 4, vesicle-inducing protein in plastids 1 /
Function (curated) vesicle formation
Localization (curated) Ch/E & Ch/S
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
RAQLALAK 869.54465 0.19 33 1
TQLDQQK 859.43994 0.11 43.9 4
AQLALAKGDEDLAR 1,469.78375 0.27 89.2 6
STVAASTR 791.41371 0.10 41.6 2
VMAMESEADALTQIGTDELEGK 2,385.05627 0.49 80.9 1
KDTLLAR 815.48648 0.18 45.5 3
DSEIENELNELR 1,459.67902 0.46 89.9 2
KSFADNATALK 1,164.61385 0.24 46.7 4
ILEQTVIEMNSDLTK 1,748.88658 0.37 109.4 4
FQMLETSSVDDDLADLKK 2,085.97758 0.41 115.2 6
VMAMESEADALTQIGTDELEGK 2,401.05119 0.50 135.6 1
MRQATAQVLASQK 1,462.75618 0.20 59.4 1
GDEDLAR 774.35077 0.14 56.1 4
VQEMIGTVNTSGALSAFEK 1,996.97748 0.43 126.7 3
AQLALAK 713.44354 0.21 38.2 2
GVVDNLVSNTR 1,172.61490 0.33 90.5 26
LLESKIQEAK 1,157.66554 0.22 38 2
SFADNATALK 1,036.51889 0.28 69.8 7
VQEMIGTVNTSGALSAFEKMEEK 2,562.18285 0.42 36.2 1
AAQQSSDDWYKR 1,453.65858 0.23 51.1 2
KGELPPGR 852.48170 0.14 37.6 4
SYANALISSFEDPEK 1,669.78348 0.49 112.2 4
AAQQSSDDWYK 1,297.55748 0.27 51.8 1
ILEQTVIEMNSDLTK 1,764.88150 0.39 113.9 10
QATAQVLASQK 1,143.62476 0.20 86.2 35
AKKDTLLAR 1,014.61855 0.15 31.5 1
VQEMIGTVNTSGALSAFEK 2,012.97240 0.44 127.8 3
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 80.45 5.53 14.02 138 ENV
Reference of the experiment Reference date Sample CAM Binding Protein
cam_bp 2013-01-01 00:00:00 CET Arabidopsis_stroma;
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST -1.10577 0.00018 BBY_high