last update : january 2015

Public data retrieved in 2014



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AT1G56190 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT1G56190
Master Protein AT1G56190.1
Description (curated) phosphoglycerate kinase, putative
Calculated MW (PPDB) 49.93
Calculated PI (PPDB) 8.27
Length 478
Curated Annotation
Description (curated) PGK2 (PGKH) phosphoglycerate kinase 2, chloroplast precursor (EC 2.7.2.3) /
Function (curated) metabolism carbon Calvin cycle
Localization (curated) Ch/S
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
IGVIESLLEK 1,099.64882 0.47 83.4 72
ADLNVPLDDNQNITDDTRIR 2,297.12474 0.37 33.7 2
LAELSKK 787.48032 0.14 46.2 2
KLASLADLYVNDAFGTAHR 2,061.06427 0.43 150.4 31
SVGDLNSVDLKGK 1,330.70918 0.27 31.7 1
KGVTTIIGGGDSVAAVEK 1,700.93077 0.32 138.9 19
GVTTIIGGGDSVAAVEK 1,572.83582 0.39 134.7 208
PSVAGFLLQK 1,058.61238 0.42 83.2 14
VILSTHLGR 994.59233 0.26 73.1 49
GTEAVANK 788.40279 0.09 60.9 8
ELDYLVGAVSNPK 1,403.72958 0.40 101.2 124
AHASTEGVTK 999.49849 0.11 65.9 65
LSELLGIEVVK 1,198.71722 0.45 103.4 14
IVPASAIPDGWMGLDIGPDSVK 2,253.13506 0.53 81.3 4
FSLAPLVPR 998.59126 0.44 73.1 221
VGVAGVMSHISTGGGASLELLEGK 2,284.17317 0.41 109.2 8
FLKPSVAGFLLQKELDYLVGAVSNPK 2,832.57883 0.65 76.3 8
AQGLSVGSSLVEEDKLELATTLLAK 2,571.40062 0.52 105.9 7
GTEAVANKLAELSK 1,429.77759 0.33 48.8 1
CDILLLGGGMIFTFYK 1,853.89427 0.69 76.6 5
VILSTHLGRPK 1,219.74005 0.23 68.4 95
VGVAGVMSHISTGGGASLELLEGK 2,268.17825 0.50 102.4 3
TFNEALDTTQTVIWNGPMGVFEFEK 2,889.35303 0.55 109.2 8
SVGDLNSVDLK 1,145.59277 0.32 56.3 28
GVSLLLPTDVVIADKFAPDANSK 2,369.28415 0.51 124.5 5
FAPDANSK 848.40280 0.15 47.7 6
PFAAIVGGSK 945.52830 0.30 37.9 1
AQGLSVGSSLVEEDK 1,517.75725 0.34 60.5 2
FLKPSVAGFLLQK 1,446.85980 0.43 97.6 113
RPFAAIVGGSK 1,101.62941 0.27 85.1 257
AAIPTIK 712.44830 0.27 34.3 17
IGVIESLLEKCDILLLGGGMIFTFYK 2,935.53253 0.72 81.1 2
ADLNVPLDDNQNITDDTR 2,027.93958 0.37 114.1 39
GVSLLLPTDVVIADK 1,538.89191 0.50 65.5 27
VGVAGVMSHISTGGGASLELLEGK 2,300.16809 0.53 144 60
FYKEEEK 971.45996 0.16 42.4 6
VLPGVVALDEATPVTV 1,578.88681 0.54 89 31
TFNEALDTTQTVIWNGPMGVFEFEK 2,873.35811 0.59 100.7 2
LASLADLYVNDAFGTAHR 1,932.96932 0.47 148.7 71
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 7.19 1.8 91.01 1,567 STR
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 1.30999 0.0021 LAM_high