last update : january 2015

Public data retrieved in 2014



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AT1G55490 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT1G55490
Master Protein AT1G55490.1
Description (curated) CPN60B (CHAPERONIN 60 BETA); ATP binding / protein binding / unfolded protein binding
Calculated MW (PPDB) 63.81
Calculated PI (PPDB) 6.2
Length 600
Curated Annotation
Description (curated) RUBB (CPN60B, Cpn60-beta-2) RuBisCO subunit binding-protein beta subunit, chloroplast precursor /
Function (curated) chaperone and protease
Localization (curated) Ch/S
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
LASKVDAIK 943.57019 0.18 51 4
EEVGLSLDKAGK 1,244.66116 0.26 37.1 1
VVAAGANPVLITR 1,279.76115 0.32 104.2 118
NLIEQAEQDYEK 1,478.68886 0.41 72.1 7
YEDLMAAGIIDPTK 1,535.75410 0.45 66.6 1
ATLDNDEEKVGADIVKR 1,871.95880 0.29 113.9 34
FGYNAATGKYEDLMAAGIIDPTK 2,477.17836 0.42 62.7 5
LADLVGVTLGPK 1,181.70192 0.41 97.2 96
VVRCCLEHAASVAK 1,580.72861 0.30 96.3 18
SAENNLYVVEGMQFDR 1,870.85188 0.46 85.6 4
IAALRAPGFGER 1,256.69888 0.30 41.9 2
AAVEEGIVVGGGCTLLR 1,690.85588 0.44 119.6 6
LSGGVAVIQVGAQTETELKEK 2,156.16876 0.44 84.7 8
IVNDGVTVAR 1,042.57706 0.22 90.1 161
FGYNAATGK 927.44498 0.23 79.9 19
ALVTELKK 900.56438 0.22 65.8 18
EVELEDPVENIGAK 1,540.76199 0.38 105.4 85
VGADIVKR 856.51300 0.18 61.1 4
LSGGVAVIQVGAQTETELK 1,899.03122 0.42 112.1 8
TNDLAGDGTTTSVVLAQGFIAEGVK 2,463.24921 0.51 132.9 9
EVEDSELADVAAVSAGNNDEIGNMIAEAMSK 3,242.40774 0.52 99.3 2
ATLDNDEEK 1,033.45636 0.16 49.3 6
EVLGNASK 816.43408 0.15 55.8 20
NLIEQAEQDYEKEK 1,735.82640 0.41 111.8 36
KGVVTLEEGK 1,058.59711 0.20 103.2 87
LQAGVNK 728.41804 0.13 38.5 6
KLRVEDALNATK 1,356.77246 0.25 63.6 4
YEDLMAAGIIDPTK 1,567.74394 0.40 96.9 40
AGKEVLGNASK 1,072.58760 0.12 81.6 21
ELHFNKDGTTIR 1,429.73134 0.24 47.1 5
SAENNLYVVEGMQFDR 1,886.84680 0.40 104.9 10
GGYPILIIAEDIEQEALATLVVNK 2,568.40497 0.80 94.2 25
GYISPYFVTDSEK 1,504.70853 0.40 97.9 27
ALVTELK 772.46942 0.27 35.1 7
VLSNDNVK 887.47121 0.15 51.4 8
YEDLMAAGIIDPTK 1,551.74902 0.39 106.5 13
NLIEQAEQDYEKEKLNER 2,248.09708 0.40 62.1 5
NVVLESK 787.44392 0.19 40.1 3
GVVTLEEGK 930.50215 0.25 50.1 8
MSVEFDNCK 1,151.41106 0.26 67.5 7
ETSTIVGDGSTQDAVKK 1,734.86352 0.21 65.6 18
ATLDNDEEKVGADIVK 1,715.85770 0.31 112.5 25
EEVGLSLDK 988.50764 0.30 50.3 7
VEDALNATK 959.49234 0.20 70.8 26
MSVEFDNCKLLLVDKK 1,960.94850 0.37 76.6 9
KSQYLDDIAILTGATVIR 1,976.09419 0.50 85.3 2
LLLVDKK 827.54800 0.23 47 25
CCLEHAASVAK 1,226.49069 0.30 40.3 1
SQYLDDIAILTGATVIR 1,847.99924 0.59 147.5 14
ALSYPLK 790.45886 0.29 21.2 1
SAENNLYVVEGMQFDR 1,902.84172 0.40 104 41
LRVEDALNATK 1,228.67750 0.29 73.8 66
MSVEFDNCKLLLVDK 1,832.85355 0.42 67.6 5
DLVGVLEDAIR 1,198.65570 0.59 83.5 113
RLQAGVNK 884.51915 0.11 52.6 7
ETSTIVGDGSTQDAVK 1,606.76857 0.25 99.2 92
LQAGVNKLADLVGVTLGPK 1,892.10941 0.51 43.9 1
APGFGER 732.35544 0.20 50 16
NAGVNGSVVSEK 1,159.58324 0.19 82.7 51
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 15.24 2.01 82.74 1,427 STR
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 1.77593 0.00008 LAM_high