last update : january 2015
Public data retrieved in 2014
AT1G55490 protein group
|
Protein AT1G55490
|
| Master Protein |
AT1G55490.1 |
| Description (curated) |
CPN60B (CHAPERONIN 60 BETA); ATP binding / protein binding / unfolded protein binding |
| Calculated MW (PPDB) |
63.81 |
| Calculated PI (PPDB) |
6.2 |
| Length |
600 |
|
|
Curated Annotation
|
| Description (curated) |
RUBB (CPN60B, Cpn60-beta-2) RuBisCO subunit binding-protein beta subunit, chloroplast precursor / |
| Function (curated) |
chaperone and protease |
| Localization (curated) |
Ch/S |
| Localization (validated) |
Yes
|
| References |
|
| Curated Protein Name |
|
| Publication (PPDB) |
|
|
|
Peptides
|
| Sequence |
Monoisotopic mass |
Retention Time |
Score |
Observed MS/MS count |
| IVNDGVTVAR |
1,042.57706 |
0.22 |
90.1 |
161 |
| VEDALNATK |
959.49234 |
0.20 |
70.8 |
26 |
| FGYNAATGK |
927.44498 |
0.23 |
79.9 |
19 |
| GVVTLEEGK |
930.50215 |
0.25 |
50.1 |
8 |
| LADLVGVTLGPK |
1,181.70192 |
0.41 |
97.2 |
96 |
| EEVGLSLDKAGK |
1,244.66116 |
0.26 |
37.1 |
1 |
| NLIEQAEQDYEK |
1,478.68886 |
0.41 |
72.1 |
7 |
| KSQYLDDIAILTGATVIR |
1,976.09419 |
0.50 |
85.3 |
2 |
| ETSTIVGDGSTQDAVKK |
1,734.86352 |
0.21 |
65.6 |
18 |
| ALSYPLK |
790.45886 |
0.29 |
21.2 |
1 |
| EEVGLSLDK |
988.50764 |
0.30 |
50.3 |
7 |
| VLSNDNVK |
887.47121 |
0.15 |
51.4 |
8 |
| NVVLESK |
787.44392 |
0.19 |
40.1 |
3 |
| EVLGNASK |
816.43408 |
0.15 |
55.8 |
20 |
| EVEDSELADVAAVSAGNNDEIGNMIAEAMSK |
3,242.40774 |
0.52 |
99.3 |
2 |
| LSGGVAVIQVGAQTETELKEK |
2,156.16876 |
0.44 |
84.7 |
8 |
| ALVTELK |
772.46942 |
0.27 |
35.1 |
7 |
| NLIEQAEQDYEKEK |
1,735.82640 |
0.41 |
111.8 |
36 |
| LRVEDALNATK |
1,228.67750 |
0.29 |
73.8 |
66 |
| ETSTIVGDGSTQDAVK |
1,606.76857 |
0.25 |
99.2 |
92 |
| GGYPILIIAEDIEQEALATLVVNK |
2,568.40497 |
0.80 |
94.2 |
25 |
| CCLEHAASVAK |
1,226.49069 |
0.30 |
40.3 |
1 |
| KGVVTLEEGK |
1,058.59711 |
0.20 |
103.2 |
87 |
| FGYNAATGKYEDLMAAGIIDPTK |
2,477.17836 |
0.42 |
62.7 |
5 |
| AGKEVLGNASK |
1,072.58760 |
0.12 |
81.6 |
21 |
| LASKVDAIK |
943.57019 |
0.18 |
51 |
4 |
| EVELEDPVENIGAK |
1,540.76199 |
0.38 |
105.4 |
85 |
| NLIEQAEQDYEKEKLNER |
2,248.09708 |
0.40 |
62.1 |
5 |
| RLQAGVNK |
884.51915 |
0.11 |
52.6 |
7 |
| NAGVNGSVVSEK |
1,159.58324 |
0.19 |
82.7 |
51 |
| VVRCCLEHAASVAK |
1,580.72861 |
0.30 |
96.3 |
18 |
| MSVEFDNCKLLLVDK |
1,832.85355 |
0.42 |
67.6 |
5 |
| GYISPYFVTDSEK |
1,504.70853 |
0.40 |
97.9 |
27 |
| SAENNLYVVEGMQFDR |
1,886.84680 |
0.40 |
104.9 |
10 |
| LQAGVNK |
728.41804 |
0.13 |
38.5 |
6 |
| KLRVEDALNATK |
1,356.77246 |
0.25 |
63.6 |
4 |
| IAALRAPGFGER |
1,256.69888 |
0.30 |
41.9 |
2 |
| SAENNLYVVEGMQFDR |
1,902.84172 |
0.40 |
104 |
41 |
| VGADIVKR |
856.51300 |
0.18 |
61.1 |
4 |
| YEDLMAAGIIDPTK |
1,567.74394 |
0.40 |
96.9 |
40 |
| YEDLMAAGIIDPTK |
1,551.74902 |
0.39 |
106.5 |
13 |
| LSGGVAVIQVGAQTETELK |
1,899.03122 |
0.42 |
112.1 |
8 |
| DLVGVLEDAIR |
1,198.65570 |
0.59 |
83.5 |
113 |
| ATLDNDEEKVGADIVK |
1,715.85770 |
0.31 |
112.5 |
25 |
| ELHFNKDGTTIR |
1,429.73134 |
0.24 |
47.1 |
5 |
| SQYLDDIAILTGATVIR |
1,847.99924 |
0.59 |
147.5 |
14 |
| APGFGER |
732.35544 |
0.20 |
50 |
16 |
| ATLDNDEEKVGADIVKR |
1,871.95880 |
0.29 |
113.9 |
34 |
| MSVEFDNCKLLLVDKK |
1,960.94850 |
0.37 |
76.6 |
9 |
| LQAGVNKLADLVGVTLGPK |
1,892.10941 |
0.51 |
43.9 |
1 |
| ATLDNDEEK |
1,033.45636 |
0.16 |
49.3 |
6 |
| TNDLAGDGTTTSVVLAQGFIAEGVK |
2,463.24921 |
0.51 |
132.9 |
9 |
| LLLVDKK |
827.54800 |
0.23 |
47 |
25 |
| VVAAGANPVLITR |
1,279.76115 |
0.32 |
104.2 |
118 |
| AAVEEGIVVGGGCTLLR |
1,690.85588 |
0.44 |
119.6 |
6 |
| MSVEFDNCK |
1,151.41106 |
0.26 |
67.5 |
7 |
| SAENNLYVVEGMQFDR |
1,870.85188 |
0.46 |
85.6 |
4 |
| YEDLMAAGIIDPTK |
1,535.75410 |
0.45 |
66.6 |
1 |
| ALVTELKK |
900.56438 |
0.22 |
65.8 |
18 |
| Reference of the experiment |
Reference date |
score % of enveloppe |
score % of thylakoïd |
score % of stroma |
Total spectral count |
Localization Score |
| at_chloro_v1 |
2010 06 |
15.24 |
2.01 |
82.74 |
1,427 |
STR |
| Reference of the experiment |
Reference date |
Log Fold Change |
pValue |
Curated Protein Complex Classes |
Differentially distributed proteins high or medium |
| thylakoïd_sub_compartments |
2013-10-01 00:00:00 CEST |
1.77593 |
0.00008 |
|
LAM_high |