last update : january 2015

Public data retrieved in 2014



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AT1G55490 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT1G55490
Master Protein AT1G55490.1
Description (curated) CPN60B (CHAPERONIN 60 BETA); ATP binding / protein binding / unfolded protein binding
Calculated MW (PPDB) 63.81
Calculated PI (PPDB) 6.2
Length 600
Curated Annotation
Description (curated) RUBB (CPN60B, Cpn60-beta-2) RuBisCO subunit binding-protein beta subunit, chloroplast precursor /
Function (curated) chaperone and protease
Localization (curated) Ch/S
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
LADLVGVTLGPK 1,181.70192 0.41 97.2 96
VLSNDNVK 887.47121 0.15 51.4 8
MSVEFDNCK 1,151.41106 0.26 67.5 7
EEVGLSLDKAGK 1,244.66116 0.26 37.1 1
EVLGNASK 816.43408 0.15 55.8 20
VEDALNATK 959.49234 0.20 70.8 26
ALVTELKK 900.56438 0.22 65.8 18
VVAAGANPVLITR 1,279.76115 0.32 104.2 118
EEVGLSLDK 988.50764 0.30 50.3 7
ALVTELK 772.46942 0.27 35.1 7
NLIEQAEQDYEK 1,478.68886 0.41 72.1 7
SQYLDDIAILTGATVIR 1,847.99924 0.59 147.5 14
SAENNLYVVEGMQFDR 1,870.85188 0.46 85.6 4
IVNDGVTVAR 1,042.57706 0.22 90.1 161
ETSTIVGDGSTQDAVKK 1,734.86352 0.21 65.6 18
NVVLESK 787.44392 0.19 40.1 3
LSGGVAVIQVGAQTETELK 1,899.03122 0.42 112.1 8
VGADIVKR 856.51300 0.18 61.1 4
AGKEVLGNASK 1,072.58760 0.12 81.6 21
FGYNAATGK 927.44498 0.23 79.9 19
ATLDNDEEKVGADIVKR 1,871.95880 0.29 113.9 34
KGVVTLEEGK 1,058.59711 0.20 103.2 87
DLVGVLEDAIR 1,198.65570 0.59 83.5 113
GYISPYFVTDSEK 1,504.70853 0.40 97.9 27
LASKVDAIK 943.57019 0.18 51 4
IAALRAPGFGER 1,256.69888 0.30 41.9 2
LSGGVAVIQVGAQTETELKEK 2,156.16876 0.44 84.7 8
KLRVEDALNATK 1,356.77246 0.25 63.6 4
ETSTIVGDGSTQDAVK 1,606.76857 0.25 99.2 92
ATLDNDEEK 1,033.45636 0.16 49.3 6
ELHFNKDGTTIR 1,429.73134 0.24 47.1 5
KSQYLDDIAILTGATVIR 1,976.09419 0.50 85.3 2
YEDLMAAGIIDPTK 1,551.74902 0.39 106.5 13
APGFGER 732.35544 0.20 50 16
EVELEDPVENIGAK 1,540.76199 0.38 105.4 85
YEDLMAAGIIDPTK 1,535.75410 0.45 66.6 1
LRVEDALNATK 1,228.67750 0.29 73.8 66
TNDLAGDGTTTSVVLAQGFIAEGVK 2,463.24921 0.51 132.9 9
RLQAGVNK 884.51915 0.11 52.6 7
YEDLMAAGIIDPTK 1,567.74394 0.40 96.9 40
MSVEFDNCKLLLVDK 1,832.85355 0.42 67.6 5
AAVEEGIVVGGGCTLLR 1,690.85588 0.44 119.6 6
GGYPILIIAEDIEQEALATLVVNK 2,568.40497 0.80 94.2 25
CCLEHAASVAK 1,226.49069 0.30 40.3 1
LLLVDKK 827.54800 0.23 47 25
NLIEQAEQDYEKEK 1,735.82640 0.41 111.8 36
LQAGVNKLADLVGVTLGPK 1,892.10941 0.51 43.9 1
ALSYPLK 790.45886 0.29 21.2 1
SAENNLYVVEGMQFDR 1,886.84680 0.40 104.9 10
MSVEFDNCKLLLVDKK 1,960.94850 0.37 76.6 9
FGYNAATGKYEDLMAAGIIDPTK 2,477.17836 0.42 62.7 5
NAGVNGSVVSEK 1,159.58324 0.19 82.7 51
GVVTLEEGK 930.50215 0.25 50.1 8
NLIEQAEQDYEKEKLNER 2,248.09708 0.40 62.1 5
ATLDNDEEKVGADIVK 1,715.85770 0.31 112.5 25
EVEDSELADVAAVSAGNNDEIGNMIAEAMSK 3,242.40774 0.52 99.3 2
LQAGVNK 728.41804 0.13 38.5 6
VVRCCLEHAASVAK 1,580.72861 0.30 96.3 18
SAENNLYVVEGMQFDR 1,902.84172 0.40 104 41
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 15.24 2.01 82.74 1,427 STR
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 1.77593 0.00008 LAM_high