last update : january 2015

Public data retrieved in 2014



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AT1G55480 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT1G55480
Master Protein AT1G55480.1
Description (curated) binding / protein binding
Calculated MW (PPDB) 37.41
Calculated PI (PPDB) 8.18
Length 335
Curated Annotation
Description (curated) ZKT (GAN) PDZ, K-box and TPR repeat containing protein, similarity to tyrosine phosphatase, chloroplast precursor /
Function (curated) RNA Binding ?
Localization (curated) Ch/Th & Ch/E
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
NGKAEDTGELTEKEIIR 1,901.96936 0.27 39.4 1
IRSDPDLETLRK 1,441.78886 0.23 37.7 4
SKDFDPLLKQFDESFINESAINAIK 2,868.45445 0.55 35.7 1
AEDTGELTEKEIIR 1,602.81003 0.30 99.7 8
SDPDLETLR 1,044.50874 0.30 31.1 2
IGPLLMQMEK 1,206.59880 0.31 38.5 1
QFDESFINESAINAIK 1,824.88933 0.47 92.3 6
SKDFDPLLK 1,061.57568 0.30 46.5 5
AEDTGELTEK 1,091.49822 0.18 58.2 7
NGKYEEALER 1,207.58325 0.22 36 1
LNQVQAGLSALEEALK 1,682.92023 0.57 102.5 6
DGGTYIDAILPGGSADK 1,648.79437 0.47 82.2 5
IRSDPDLETLR 1,313.69391 0.28 51.7 5
SGYEDFKR 1,000.46136 0.21 26 1
IGPLLMQMEK 1,222.59372 0.32 56.7 12
DFDPLLK 846.44870 0.40 27.7 1
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 24.73 71.4 3.87 61 THY-ENV
Reference of the experiment Reference date Sample CAM Binding Protein
cam_bp 2013-01-01 00:00:00 CET Arabidopsis_stroma;Arabidopsis_membranes;
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 3.1123 0 LAM_high