last update : january 2015

Public data retrieved in 2014



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AT1G05190 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT1G05190
Master Protein AT1G05190.1
Description (curated) EMB2394 (EMBRYO DEFECTIVE 2394); structural constituent of ribosome
Calculated MW (PPDB) 24.7
Calculated PI (PPDB) 9.89
Length 223
Curated Annotation
Description (curated) RPL6 50S ribosomal protein L6, chloroplast precursor /
Function (curated) translation stroma
Localization (curated) Ch/S & Ch/E
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
IGKQPIAVPSNVTIALEGQDLK 2,290.28957 0.40 64.7 3
YSDEIVR 880.42902 0.23 43.2 7
ANQMHGLFR 1,088.51851 0.23 31.5 2
MQIPDSLK 930.48444 0.35 33.5 2
ATVDGKELVLNLGFSHPVK 2,023.11014 0.44 40.7 2
ELVLNLGFSHPVK 1,451.81358 0.41 95.3 7
TLTDNMVVGVSK 1,294.64383 0.28 90.1 17
ITVSGYDKSEIGQFAATVR 2,041.04794 0.42 134 4
SEIGQFAATVR 1,177.60908 0.36 96 18
ITVSGYDK 881.44942 0.23 33.5 3
VKVEENTR 973.51921 0.10 48.9 11
VKGPLGELALTYPR 1,512.86635 0.40 68.1 5
MQIPDSLK 962.47427 0.28 39.8 5
KLILVGVGYR 1,116.70184 0.35 53.5 8
RANQMHGLFR 1,260.61453 0.20 51.4 6
GPLGELALTYPR 1,285.70299 0.44 83 12
TLTDNMVVGVSK 1,278.64891 0.27 77.5 7
LILVGVGYR 988.60689 0.40 57.5 6
ANQMHGLFR 1,104.51343 0.23 57.7 15
EESGFLR 836.40279 0.26 33 1
QPIAVPSNVTIALEGQDLK 1,992.08910 0.47 89.2 12
EVELTKEESGFLR 1,535.78307 0.35 101.6 23
TLTDNMVVGVSK 1,262.65399 0.35 37.4 2
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 28.74 0 71.26 171 STR-ENV
Reference of the experiment Reference date Sample CAM Binding Protein
cam_bp 2013-01-01 00:00:00 CET Arabidopsis_stroma;Arabidopsis_membranes;Spinach_stroma_env;
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 1.25913 0.00196 LAM_high