last update : january 2015
Public data retrieved in 2014
AT1G05190 protein group
Protein AT1G05190
|
Master Protein |
AT1G05190.1 |
Description (curated) |
EMB2394 (EMBRYO DEFECTIVE 2394); structural constituent of ribosome |
Calculated MW (PPDB) |
24.7 |
Calculated PI (PPDB) |
9.89 |
Length |
223 |
|
Curated Annotation
|
Description (curated) |
RPL6 50S ribosomal protein L6, chloroplast precursor / |
Function (curated) |
translation stroma |
Localization (curated) |
Ch/S & Ch/E |
Localization (validated) |
Yes
|
References |
|
Curated Protein Name |
|
Publication (PPDB) |
|
|
Peptides
|
Sequence |
Monoisotopic mass |
Retention Time |
Score |
Observed MS/MS count |
GPLGELALTYPR |
1,285.70299 |
0.44 |
83 |
12 |
ANQMHGLFR |
1,104.51343 |
0.23 |
57.7 |
15 |
EVELTKEESGFLR |
1,535.78307 |
0.35 |
101.6 |
23 |
MQIPDSLK |
930.48444 |
0.35 |
33.5 |
2 |
YSDEIVR |
880.42902 |
0.23 |
43.2 |
7 |
ITVSGYDK |
881.44942 |
0.23 |
33.5 |
3 |
RANQMHGLFR |
1,260.61453 |
0.20 |
51.4 |
6 |
VKVEENTR |
973.51921 |
0.10 |
48.9 |
11 |
TLTDNMVVGVSK |
1,294.64383 |
0.28 |
90.1 |
17 |
ITVSGYDKSEIGQFAATVR |
2,041.04794 |
0.42 |
134 |
4 |
TLTDNMVVGVSK |
1,278.64891 |
0.27 |
77.5 |
7 |
TLTDNMVVGVSK |
1,262.65399 |
0.35 |
37.4 |
2 |
EESGFLR |
836.40279 |
0.26 |
33 |
1 |
LILVGVGYR |
988.60689 |
0.40 |
57.5 |
6 |
ANQMHGLFR |
1,088.51851 |
0.23 |
31.5 |
2 |
IGKQPIAVPSNVTIALEGQDLK |
2,290.28957 |
0.40 |
64.7 |
3 |
QPIAVPSNVTIALEGQDLK |
1,992.08910 |
0.47 |
89.2 |
12 |
MQIPDSLK |
962.47427 |
0.28 |
39.8 |
5 |
KLILVGVGYR |
1,116.70184 |
0.35 |
53.5 |
8 |
SEIGQFAATVR |
1,177.60908 |
0.36 |
96 |
18 |
ATVDGKELVLNLGFSHPVK |
2,023.11014 |
0.44 |
40.7 |
2 |
ELVLNLGFSHPVK |
1,451.81358 |
0.41 |
95.3 |
7 |
VKGPLGELALTYPR |
1,512.86635 |
0.40 |
68.1 |
5 |
Reference of the experiment |
Reference date |
score % of enveloppe |
score % of thylakoïd |
score % of stroma |
Total spectral count |
Localization Score |
at_chloro_v1 |
2010 06 |
28.74 |
0 |
71.26 |
171 |
STR-ENV |
Reference of the experiment |
Reference date |
Sample CAM Binding Protein |
cam_bp |
2013-01-01 00:00:00 CET |
Arabidopsis_stroma;Arabidopsis_membranes;Spinach_stroma_env; |
Reference of the experiment |
Reference date |
Log Fold Change |
pValue |
Curated Protein Complex Classes |
Differentially distributed proteins high or medium |
thylakoïd_sub_compartments |
2013-10-01 00:00:00 CEST |
1.25913 |
0.00196 |
|
LAM_high |