last update : january 2015

Public data retrieved in 2014


AT1G54520 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT1G54520
Master Protein AT1G54520.1
Description (curated) similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96363.1); contains InterPro domain Protein of unknown function DUF1517 (InterPro:IPR010903)
Calculated MW (PPDB) 42.84
Calculated PI (PPDB) 9.22
Length 391
Curated Annotation
Description (curated) HP42b conserved plant and cyanobacterial protein, similar to Slr0404 protein [Synechocystis sp], chloroplast precursor /
Function (curated) unknown
Localization (curated) Ch/E/IM
Localization (validated) No
Curated Protein Name
Publication (PPDB)
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
ELLEDYPLLRPL 1,469.81294 0.55 56.9 1
LQVGLLGLGR 1,024.63925 0.44 69.2 1
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 100 0 0 2 ENV
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 1.92244 0.00093 LAM_high