last update : january 2015

Public data retrieved in 2014



Home

AT1G49970 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT1G49970
Master Protein AT1G49970.1
Description (curated) CLPR1 (Clp protease proteolytic subunit 5); endopeptidase Clp
Calculated MW (PPDB) 42.62
Calculated PI (PPDB) 8.81
Length 387
Curated Annotation
Description (curated) ClpR1 (nClpP5) ATP-dependent Clp protease proteolytic subunit, chloroplast precursor /
Function (curated) chaperone and protease
Localization (curated) Ch/S & Ch/E
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
TAPPDLPSLLLDAR 1,477.81403 0.51 51.5 11
GGGGGGGSERPR 1,042.49033 0.05 38.8 6
SKEQINEDIK 1,202.61424 0.18 66.5 14
DYDGTLAQR 1,037.47777 0.23 59 16
ELDANTEYYIELLAK 1,783.88794 0.56 103.7 4
PGGGSPAAPAGLR 1,106.58319 0.22 42.7 3
IADSQDSSFEK 1,225.54623 0.22 85.3 13
IADSQDSSFEKR 1,381.64734 0.18 76.7 9
EQINEDIK 987.48726 0.21 31.9 2
EQINEDIKRPK 1,368.73608 0.17 45.1 2
AMRPGGGSPAAPAGLR 1,480.75680 0.23 37.6 4
SSGAAIDMWIK 1,193.57503 0.40 52.4 4
AMRPGGGSPAAPAGLR 1,496.75172 0.22 77.7 28
AVQPHSSTK 953.49303 0.03 39.2 1
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 37.77 0 62.23 109 STR-ENV
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 0 1 -