last update : january 2015

Public data retrieved in 2014



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AT1G48460 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT1G48460
Master Protein AT1G48460.1
Description (curated) similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G63040.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G63040.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61244.1)
Calculated MW (PPDB) 38.07
Calculated PI (PPDB) 9.68
Length 340
Curated Annotation
Description (curated) HP38c conserved plant protein, weak similarity to MscS Mechanosensitive ion channel, chloroplast precursor /
Function (curated) transporter ion channel ?
Localization (curated) Ch/E/IM
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
GYLTSAFLTMGLK 1,416.73224 0.48 100 2
DAATTAEITER 1,176.56222 0.24 100.5 10
LFPSRPVGENY 1,277.64038 0.34 39.7 3
SGSVSFNGLTHQLVEESK 1,917.94315 0.41 88.6 2
VQRPYLDFSSK 1,338.69316 0.31 46 2
GYLTSAFLTMGLK 1,432.72716 0.50 89.8 2
AATFVQR 791.42896 0.19 36.9 3
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 100 0 0 24 ENV
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 0.33333 0.24292 -