last update : january 2015

Public data retrieved in 2014



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AT1G42970 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT1G42970
Master Protein AT1G42970.1
Description (curated) GAPB (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE B SUBUNIT); glyceraldehyde-3-phosphate dehydrogenase
Calculated MW (PPDB) 47.66
Calculated PI (PPDB) 6.33
Length 447
Curated Annotation
Description (curated) GAPB (G3PB) glyceraldehyde-3-phosphate dehydrogenase B, chloroplast precursor (EC 1.2.1.13) /
Function (curated) metabolism carbon Calvin cycle
Localization (curated) Ch/S & Ch/E
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
NASHLLKYDSMLGTFK 1,823.92395 0.42 61.1 2
KAANGPMK 847.42215 0.04 47.2 1
AAALNIVPTSTGAAK 1,383.77212 0.32 109.7 412
CSDVSTTIDSSLTMVMGDDMVK 2,445.97430 0.48 130.1 3
DSPLEVVVLNDSGGVK 1,626.84639 0.46 137 64
GLTAEDVNEAFR 1,320.63094 0.37 92.3 85
GILDVCDAPLVSVDFR 1,717.87085 0.61 92.8 2
AANGPMK 703.33228 0.04 36.1 1
VPTPNVSVVDLVINVEKK 1,949.11964 0.48 124.3 23
GTMTTTHSYTGDQR 1,570.66818 0.14 71.3 74
YDSMLGTFK 1,092.47974 0.32 68.8 54
YDSMLGTFKAEVK 1,519.72279 0.30 42.5 2
LNGIALRVPTPNVSVVDLVINVEK 2,558.47946 0.60 64.8 2
VVDLAHLVASK 1,150.67096 0.36 85.7 161
LPWAELGIDIVIEGTGVFVDGPGAGK 2,609.37398 0.78 86.2 1
ARAAALNIVPTSTGAAK 1,610.91034 0.27 109.2 9
CSDVSTTIDSSLTMVMGDDMVK 2,477.96414 0.52 103.9 6
LIKVVSNR 927.58650 0.25 32.7 3
HIQAGASK 810.43477 0.07 59.3 46
YDSMLGTFK 1,060.48990 0.38 52.2 3
GILDVCDAPLVSVDFR 1,765.85559 0.59 111.5 22
LNGIALR 755.46533 0.28 62.7 48
CSDVSTTIDSSLTMVMGDDMVK 2,461.96922 0.50 96.6 3
TNPADEECK 1,053.39204 0.12 43.8 3
VLDEEFGIVK 1,147.61243 0.39 100.8 202
KGLTAEDVNEAFR 1,448.72589 0.32 103.3 40
AVSLVLPQLK 1,066.67499 0.42 88.4 134
KGLTAEDVNEAFRK 1,576.82085 0.28 114.4 60
KDSPLEVVVLNDSGGVK 1,754.94134 0.38 135.4 43
LLDASHR 810.43478 0.15 64.8 112
WPGAEAVGSGDPLEDFCK 1,924.81484 0.51 120.3 4
VAINGFGR 832.45548 0.28 62.7 71
VIITAPAK 811.51671 0.23 54.6 75
VVAWYDNEWGYSQR 1,771.79538 0.46 129.6 23
GTMTTTHSYTGDQR 1,586.66310 0.14 124.5 162
GKLNGIALR 940.58174 0.24 52.5 23
IVDNETISVDGK 1,288.65102 0.27 107.2 142
NASHLLK 781.44461 0.16 44 31
VPTPNVSVVDLVINVEK 1,821.02469 0.54 144.7 93
GTMTTTHSYTGDQR 1,554.67326 0.18 95.3 8
TNPADEECKVYD 1,430.55072 0.26 47 3
WPGAEAVGSGDPLEDFCK 1,876.83009 0.55 97.8 1
VVSNRDPLK 1,026.58215 0.18 34.7 4
GLTAEDVNEAFRK 1,448.72589 0.32 91.8 34
YDSMLGTFK 1,076.48482 0.30 63.8 33
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 16.79 5 78.22 2,212 STR-ENV