last update : january 2015
Public data retrieved in 2014
AT1G42970 protein group
Protein AT1G42970
|
Master Protein |
AT1G42970.1 |
Description (curated) |
GAPB (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE B SUBUNIT); glyceraldehyde-3-phosphate dehydrogenase |
Calculated MW (PPDB) |
47.66 |
Calculated PI (PPDB) |
6.33 |
Length |
447 |
|
Curated Annotation
|
Description (curated) |
GAPB (G3PB) glyceraldehyde-3-phosphate dehydrogenase B, chloroplast precursor (EC 1.2.1.13) / |
Function (curated) |
metabolism carbon Calvin cycle |
Localization (curated) |
Ch/S & Ch/E |
Localization (validated) |
Yes
|
References |
|
Curated Protein Name |
|
Publication (PPDB) |
|
|
Peptides
|
Sequence |
Monoisotopic mass |
Retention Time |
Score |
Observed MS/MS count |
NASHLLKYDSMLGTFK |
1,823.92395 |
0.42 |
61.1 |
2 |
YDSMLGTFK |
1,092.47974 |
0.32 |
68.8 |
54 |
VPTPNVSVVDLVINVEK |
1,821.02469 |
0.54 |
144.7 |
93 |
GKLNGIALR |
940.58174 |
0.24 |
52.5 |
23 |
GLTAEDVNEAFRK |
1,448.72589 |
0.32 |
91.8 |
34 |
TNPADEECK |
1,053.39204 |
0.12 |
43.8 |
3 |
YDSMLGTFK |
1,060.48990 |
0.38 |
52.2 |
3 |
KDSPLEVVVLNDSGGVK |
1,754.94134 |
0.38 |
135.4 |
43 |
WPGAEAVGSGDPLEDFCK |
1,876.83009 |
0.55 |
97.8 |
1 |
WPGAEAVGSGDPLEDFCK |
1,924.81484 |
0.51 |
120.3 |
4 |
ARAAALNIVPTSTGAAK |
1,610.91034 |
0.27 |
109.2 |
9 |
LNGIALR |
755.46533 |
0.28 |
62.7 |
48 |
NASHLLK |
781.44461 |
0.16 |
44 |
31 |
CSDVSTTIDSSLTMVMGDDMVK |
2,477.96414 |
0.52 |
103.9 |
6 |
GILDVCDAPLVSVDFR |
1,765.85559 |
0.59 |
111.5 |
22 |
YDSMLGTFKAEVK |
1,519.72279 |
0.30 |
42.5 |
2 |
AVSLVLPQLK |
1,066.67499 |
0.42 |
88.4 |
134 |
VVDLAHLVASK |
1,150.67096 |
0.36 |
85.7 |
161 |
DSPLEVVVLNDSGGVK |
1,626.84639 |
0.46 |
137 |
64 |
GTMTTTHSYTGDQR |
1,570.66818 |
0.14 |
71.3 |
74 |
VVSNRDPLK |
1,026.58215 |
0.18 |
34.7 |
4 |
VIITAPAK |
811.51671 |
0.23 |
54.6 |
75 |
LLDASHR |
810.43478 |
0.15 |
64.8 |
112 |
HIQAGASK |
810.43477 |
0.07 |
59.3 |
46 |
VLDEEFGIVK |
1,147.61243 |
0.39 |
100.8 |
202 |
LPWAELGIDIVIEGTGVFVDGPGAGK |
2,609.37398 |
0.78 |
86.2 |
1 |
KGLTAEDVNEAFRK |
1,576.82085 |
0.28 |
114.4 |
60 |
IVDNETISVDGK |
1,288.65102 |
0.27 |
107.2 |
142 |
CSDVSTTIDSSLTMVMGDDMVK |
2,461.96922 |
0.50 |
96.6 |
3 |
CSDVSTTIDSSLTMVMGDDMVK |
2,445.97430 |
0.48 |
130.1 |
3 |
LNGIALRVPTPNVSVVDLVINVEK |
2,558.47946 |
0.60 |
64.8 |
2 |
VVAWYDNEWGYSQR |
1,771.79538 |
0.46 |
129.6 |
23 |
GLTAEDVNEAFR |
1,320.63094 |
0.37 |
92.3 |
85 |
KGLTAEDVNEAFR |
1,448.72589 |
0.32 |
103.3 |
40 |
AANGPMK |
703.33228 |
0.04 |
36.1 |
1 |
KAANGPMK |
847.42215 |
0.04 |
47.2 |
1 |
VPTPNVSVVDLVINVEKK |
1,949.11964 |
0.48 |
124.3 |
23 |
GTMTTTHSYTGDQR |
1,554.67326 |
0.18 |
95.3 |
8 |
VAINGFGR |
832.45548 |
0.28 |
62.7 |
71 |
AAALNIVPTSTGAAK |
1,383.77212 |
0.32 |
109.7 |
412 |
GTMTTTHSYTGDQR |
1,586.66310 |
0.14 |
124.5 |
162 |
LIKVVSNR |
927.58650 |
0.25 |
32.7 |
3 |
TNPADEECKVYD |
1,430.55072 |
0.26 |
47 |
3 |
YDSMLGTFK |
1,076.48482 |
0.30 |
63.8 |
33 |
GILDVCDAPLVSVDFR |
1,717.87085 |
0.61 |
92.8 |
2 |
Reference of the experiment |
Reference date |
score % of enveloppe |
score % of thylakoïd |
score % of stroma |
Total spectral count |
Localization Score |
at_chloro_v1 |
2010 06 |
16.79 |
5 |
78.22 |
2,212 |
STR-ENV |