last update : january 2015

Public data retrieved in 2014



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AT1G42970 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT1G42970
Master Protein AT1G42970.1
Description (curated) GAPB (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE B SUBUNIT); glyceraldehyde-3-phosphate dehydrogenase
Calculated MW (PPDB) 47.66
Calculated PI (PPDB) 6.33
Length 447
Curated Annotation
Description (curated) GAPB (G3PB) glyceraldehyde-3-phosphate dehydrogenase B, chloroplast precursor (EC 1.2.1.13) /
Function (curated) metabolism carbon Calvin cycle
Localization (curated) Ch/S & Ch/E
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
HIQAGASK 810.43477 0.07 59.3 46
YDSMLGTFKAEVK 1,519.72279 0.30 42.5 2
DSPLEVVVLNDSGGVK 1,626.84639 0.46 137 64
GLTAEDVNEAFRK 1,448.72589 0.32 91.8 34
VPTPNVSVVDLVINVEK 1,821.02469 0.54 144.7 93
TNPADEECKVYD 1,430.55072 0.26 47 3
LPWAELGIDIVIEGTGVFVDGPGAGK 2,609.37398 0.78 86.2 1
KDSPLEVVVLNDSGGVK 1,754.94134 0.38 135.4 43
GILDVCDAPLVSVDFR 1,765.85559 0.59 111.5 22
WPGAEAVGSGDPLEDFCK 1,924.81484 0.51 120.3 4
AAALNIVPTSTGAAK 1,383.77212 0.32 109.7 412
GTMTTTHSYTGDQR 1,586.66310 0.14 124.5 162
KAANGPMK 847.42215 0.04 47.2 1
ARAAALNIVPTSTGAAK 1,610.91034 0.27 109.2 9
CSDVSTTIDSSLTMVMGDDMVK 2,477.96414 0.52 103.9 6
KGLTAEDVNEAFRK 1,576.82085 0.28 114.4 60
VVSNRDPLK 1,026.58215 0.18 34.7 4
CSDVSTTIDSSLTMVMGDDMVK 2,445.97430 0.48 130.1 3
KGLTAEDVNEAFR 1,448.72589 0.32 103.3 40
GILDVCDAPLVSVDFR 1,717.87085 0.61 92.8 2
YDSMLGTFK 1,092.47974 0.32 68.8 54
LIKVVSNR 927.58650 0.25 32.7 3
IVDNETISVDGK 1,288.65102 0.27 107.2 142
VAINGFGR 832.45548 0.28 62.7 71
AVSLVLPQLK 1,066.67499 0.42 88.4 134
GLTAEDVNEAFR 1,320.63094 0.37 92.3 85
TNPADEECK 1,053.39204 0.12 43.8 3
VVDLAHLVASK 1,150.67096 0.36 85.7 161
VLDEEFGIVK 1,147.61243 0.39 100.8 202
GKLNGIALR 940.58174 0.24 52.5 23
YDSMLGTFK 1,060.48990 0.38 52.2 3
VPTPNVSVVDLVINVEKK 1,949.11964 0.48 124.3 23
WPGAEAVGSGDPLEDFCK 1,876.83009 0.55 97.8 1
VVAWYDNEWGYSQR 1,771.79538 0.46 129.6 23
NASHLLK 781.44461 0.16 44 31
LNGIALRVPTPNVSVVDLVINVEK 2,558.47946 0.60 64.8 2
CSDVSTTIDSSLTMVMGDDMVK 2,461.96922 0.50 96.6 3
GTMTTTHSYTGDQR 1,570.66818 0.14 71.3 74
NASHLLKYDSMLGTFK 1,823.92395 0.42 61.1 2
YDSMLGTFK 1,076.48482 0.30 63.8 33
LLDASHR 810.43478 0.15 64.8 112
AANGPMK 703.33228 0.04 36.1 1
VIITAPAK 811.51671 0.23 54.6 75
GTMTTTHSYTGDQR 1,554.67326 0.18 95.3 8
LNGIALR 755.46533 0.28 62.7 48
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 16.79 5 78.22 2,212 STR-ENV