last update : january 2015

Public data retrieved in 2014



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AT1G42970 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT1G42970
Master Protein AT1G42970.1
Description (curated) GAPB (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE B SUBUNIT); glyceraldehyde-3-phosphate dehydrogenase
Calculated MW (PPDB) 47.66
Calculated PI (PPDB) 6.33
Length 447
Curated Annotation
Description (curated) GAPB (G3PB) glyceraldehyde-3-phosphate dehydrogenase B, chloroplast precursor (EC 1.2.1.13) /
Function (curated) metabolism carbon Calvin cycle
Localization (curated) Ch/S & Ch/E
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
YDSMLGTFK 1,060.48990 0.38 52.2 3
GTMTTTHSYTGDQR 1,570.66818 0.14 71.3 74
DSPLEVVVLNDSGGVK 1,626.84639 0.46 137 64
YDSMLGTFK 1,076.48482 0.30 63.8 33
YDSMLGTFKAEVK 1,519.72279 0.30 42.5 2
AAALNIVPTSTGAAK 1,383.77212 0.32 109.7 412
GKLNGIALR 940.58174 0.24 52.5 23
TNPADEECKVYD 1,430.55072 0.26 47 3
YDSMLGTFK 1,092.47974 0.32 68.8 54
GTMTTTHSYTGDQR 1,554.67326 0.18 95.3 8
KGLTAEDVNEAFRK 1,576.82085 0.28 114.4 60
IVDNETISVDGK 1,288.65102 0.27 107.2 142
VVDLAHLVASK 1,150.67096 0.36 85.7 161
KGLTAEDVNEAFR 1,448.72589 0.32 103.3 40
WPGAEAVGSGDPLEDFCK 1,924.81484 0.51 120.3 4
LPWAELGIDIVIEGTGVFVDGPGAGK 2,609.37398 0.78 86.2 1
TNPADEECK 1,053.39204 0.12 43.8 3
AVSLVLPQLK 1,066.67499 0.42 88.4 134
KAANGPMK 847.42215 0.04 47.2 1
CSDVSTTIDSSLTMVMGDDMVK 2,461.96922 0.50 96.6 3
VAINGFGR 832.45548 0.28 62.7 71
LNGIALR 755.46533 0.28 62.7 48
AANGPMK 703.33228 0.04 36.1 1
VLDEEFGIVK 1,147.61243 0.39 100.8 202
CSDVSTTIDSSLTMVMGDDMVK 2,445.97430 0.48 130.1 3
LIKVVSNR 927.58650 0.25 32.7 3
LLDASHR 810.43478 0.15 64.8 112
GLTAEDVNEAFRK 1,448.72589 0.32 91.8 34
KDSPLEVVVLNDSGGVK 1,754.94134 0.38 135.4 43
GTMTTTHSYTGDQR 1,586.66310 0.14 124.5 162
GLTAEDVNEAFR 1,320.63094 0.37 92.3 85
NASHLLK 781.44461 0.16 44 31
LNGIALRVPTPNVSVVDLVINVEK 2,558.47946 0.60 64.8 2
CSDVSTTIDSSLTMVMGDDMVK 2,477.96414 0.52 103.9 6
VVAWYDNEWGYSQR 1,771.79538 0.46 129.6 23
HIQAGASK 810.43477 0.07 59.3 46
VPTPNVSVVDLVINVEKK 1,949.11964 0.48 124.3 23
ARAAALNIVPTSTGAAK 1,610.91034 0.27 109.2 9
VPTPNVSVVDLVINVEK 1,821.02469 0.54 144.7 93
GILDVCDAPLVSVDFR 1,765.85559 0.59 111.5 22
GILDVCDAPLVSVDFR 1,717.87085 0.61 92.8 2
WPGAEAVGSGDPLEDFCK 1,876.83009 0.55 97.8 1
NASHLLKYDSMLGTFK 1,823.92395 0.42 61.1 2
VVSNRDPLK 1,026.58215 0.18 34.7 4
VIITAPAK 811.51671 0.23 54.6 75
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 16.79 5 78.22 2,212 STR-ENV