last update : january 2015

Public data retrieved in 2014



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AT1G42960 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT1G42960
Master Protein AT1G42960.1
Description (curated) expressed protein localized to the inner membrane of the chloroplast.
Calculated MW (PPDB) 17.82
Calculated PI (PPDB) 8.54
Length 168
Curated Annotation
Description (curated) HP17 conserved protein, similar to Ssl2009 protein [Synechocystis sp], no similarity to characterized protein, chloroplast precursor /
Function (curated) unknown
Localization (curated) Ch/E/IM
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
IAQLNSAIDDVSSQLK 1,700.89444 0.45 127.8 24
AIAGADRK 800.45041 0.08 51.4 4
FIYDEEK 942.43343 0.27 40.6 1
AIAGADR 672.35545 0.12 35.1 5
SEDTPNGAALSTDEIEATA 1,890.83302 0.41 98.7 10
FIYDEEKALEK 1,383.69214 0.33 66 6
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 91.42 8.58 0 49 ENV
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 1.56297 0.00005 LAM_high