last update : january 2015

Public data retrieved in 2014



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AT1G29930 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT1G29930
Master Protein AT1G29930.1
Description (curated) CAB1 (CHLOROPHYLL A/B BINDING PROTEIN 1); chlorophyll binding
Calculated MW (PPDB) 28.24
Calculated PI (PPDB) 5.46
Length 267
Curated Annotation
Description (curated) LHCB1.3 (LHCII-1.3) photosystem II light harvesting complex gene 1,3, chlorophyll A-B binding protein, chloroplast precursor /
Function (curated) PS LHCII
Localization (curated) Ch/Th
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
FGEAVWFK 982.49120 0.48 61.9 40
LSPAASEVLGSGR 1,242.65675 0.31 74.5 7
YLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAR 3,956.76923 0.61 187.1 14
PKGPSGSPWYGSDR 1,489.69495 0.25 69.4 2
VAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVK 3,856.94093 0.63 200.3 5
LAMFSMFGFFVQAIVTGK 1,993.02045 0.69 36.2 2
GPSGSPWYGSDRVK 1,491.71059 0.26 78.1 2
VKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAR 4,183.93259 0.58 158.8 3
NGVKFGEAVWFK 1,380.71893 0.42 51.9 3
GPSGSPWYGSDR 1,264.54723 0.29 83 45
WAMLGALGCVFPELLAR 1,861.95821 0.63 109.7 4
WAMLGALGCVFPELLAR 1,909.94295 0.67 118.6 7
NRELEVIHSR 1,251.66834 0.24 68.6 441
GPIENLADHLADPVNNNAWAFATNFVPGK 3,091.51508 0.58 115.2 17
VAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELK 3,629.77757 0.74 105.5 42
LAMFSMFGFFVQAIVTGK 2,025.01028 0.70 133.7 85
KTVAKPK 770.50139 0.06 38 1
LAMFSMFGFFVQAIVTGK 2,009.01537 0.72 86.9 3
LAMFSMFGFFVQAIVTGK 2,057.00012 0.70 153.6 88
VKELKNGR 942.56100 0.06 41.4 3
WAMLGALGCVFPELLAR 1,925.93787 0.68 82.9 6
ELEVIHSR 981.52431 0.22 62.2 147
LAMFSMFGFFVQAIVTGK 2,041.00520 0.73 133.1 109
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST -0.31134 0.00451 BBY_medium
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 1.33 98 0.68 1,049 THY