last update : january 2015

Public data retrieved in 2014



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ATCgG1130 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein ATCgG1130
Master Protein AtCg01130
Description (curated) hypothetical protein
Calculated MW (PPDB) 213.69
Calculated PI (PPDB) 9.74
Length 1,786
Curated Annotation
Description (curated) YCF1.2 (YCF1-B) essential protein, chloroplast encoded /
Function (curated) unknown
Localization (curated) Ch/Th
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
NLIPLFGPR 1,025.60216 0.47 30.1 10
GEMSLDILMIEK 1,441.66800 0.46 89 2
YSQQSDFR 1,029.45155 0.20 40.9 4
NNYDFFVPEK 1,271.58220 0.42 54.9 8
GSLLVTQSILR 1,185.70808 0.41 84.3 7
FLFDIVR 908.51195 0.49 44.7 8
DLDLDKDKNNLINLK 1,769.95229 0.37 77.7 9
ITTQLFFESTKK 1,441.78165 0.36 56.3 3
INKDDEFHVR 1,271.62581 0.21 52.3 3
ILNFWFTK 1,067.58037 0.52 30.2 1
ESAGQVELESDK 1,290.59389 0.22 57.2 1
QNLTNSCTK 1,055.45532 0.13 45.3 2
NQIEEISKEK 1,216.62988 0.21 36.9 2
GEMSLDILMIEK 1,409.67816 0.43 76 2
VMDEGEEGTEK 1,238.49721 0.11 72.4 4
TDSNDQTLIK 1,133.55643 0.22 64.8 20
TIGISLVHK 966.58618 0.29 46.5 4
LNNPNEIAVSSIER 1,554.80012 0.34 98.4 12
TVSENLYGNK 1,123.55090 0.23 47.1 7
LPPFQIITETYR 1,476.79764 0.49 65.3 4
KNNYDFFVPEK 1,399.67716 0.36 54 1
KGILIIEPVR 1,136.72807 0.34 55 3
TVIWEFFQAK 1,267.66006 0.54 37.4 2
DNQNSDQNDEMALIR 1,777.75368 0.28 110.8 5
ENSNLEFFK 1,126.52943 0.38 40.9 3
NWLTDGIQIK 1,186.63460 0.48 49.7 4
FFEADSLLNPK 1,279.64481 0.44 78 10
IHGLLLK 792.52212 0.28 32.4 2
DDEFHVR 916.40387 0.22 23.3 1
ITQTDLANK 1,002.53456 0.18 53.4 9
KGFIPSNEK 1,018.54469 0.20 45.5 2
KFEQTIEK 1,021.54437 0.18 29.8 5
TFLNSEVNQWK 1,364.67242 0.42 58 2
KPSFFEPISK 1,178.63351 0.33 57.1 11
FYNLNKEEK 1,183.58728 0.23 47.3 3
ILDKYIYK 1,054.60625 0.29 32.4 1
NDKIENIVR 1,099.59853 0.24 50.4 6
CTYNGVQLSETEFPR 1,790.77808 0.45 80.5 3
IYDPFLHGISR 1,316.68768 0.41 78.1 8
LEDLACMNR 1,127.45868 0.25 40.7 3
NIEENFAESTIKK 1,521.76743 0.32 62.5 6
HFFDYGSTTR 1,229.54651 0.30 28.8 3
DKINKDDEFHVR 1,514.74771 0.20 39.3 1
FLVSELR 862.49121 0.36 44.3 4
ESAGQVELESDKETK 1,648.77911 0.20 93.8 13
FEQTIEK 893.44942 0.20 32.6 2
SQYQYNLPQISWAR 1,752.85834 0.48 56.5 4
INSEEEIK 960.47635 0.18 56.1 4
KDSIYNLFCYK 1,440.65947 0.49 51.8 1
VMDEGEEGTEK 1,254.49213 0.12 61.3 2
LSFFSEPQQEEK 1,467.68813 0.38 65 11
INKDSLVLNPSLTK 1,540.88242 0.34 58.2 3
IPSPIFTK 901.52728 0.33 51.7 5
GEMSLDILMIEK 1,425.67308 0.45 89.2 5
NIQNLTTVLHK 1,279.72481 0.33 50.4 4
VTIEPWVDTK 1,186.62337 0.39 35.2 2
KLSFFSEPQQEEK 1,595.78308 0.33 90.7 6
NTLYFISTIK 1,198.65974 0.45 71.2 11
ILICFNLKKK 1,218.75218 0.18 18.4 1
LVNIYMFR 1,070.55824 0.41 40.3 2
SNTEAELDLFLTR 1,507.75180 0.50 91.2 2
NIEENFAESTIK 1,393.67247 0.37 88.9 11
EIYELNEPK 1,133.56041 0.30 42.1 12
LVNIYMFR 1,086.55316 0.43 52.9 5
KLPPFQIITETYR 1,604.89259 0.43 47.5 5
NQIEEISK 959.49234 0.21 29.1 1
DNQNSDQNDEMALIR 1,793.74860 0.30 110.7 6
GILIIEPVR 1,008.63312 0.41 50.8 13
VHSPLFFDR 1,116.57159 0.35 29 1
DLDLDKDK 960.47638 0.20 25.7 1
LEDLACMNR 1,143.45360 0.28 33.8 1
DSLVLNPSLTK 1,185.66048 0.37 84.7 12
IDKITQTDLANK 1,358.74052 0.23 90.8 3
ITTQLFFESTK 1,313.68669 0.42 78.4 6
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 97.57 2.43 0 317 ENV