last update : january 2015

Public data retrieved in 2014



Home

ATCG01110 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein ATCG01110
Master Protein AtCg01110
Description (curated) Encodes the 49KDa plastid NAD(P)H dehydrogenase subunit H protein. Its transcription is regulated by an ndhF-specific plastid sigma factor, SIG4.
Calculated MW (PPDB) 45.5
Calculated PI (PPDB) 5.39
Length 393
Curated Annotation
Description (curated)
Function (curated)
Localization (curated)
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
VIMLELSR 991.53719 0.35 51 6
KPSPTFELSK 1,132.61279 0.25 47.7 10
IRPPGFINLQILPELVK 1,946.17163 0.54 76.7 9
IGGIAADLPYGWIDK 1,587.82964 0.52 47.5 1
NPIFLER 887.48646 0.33 55 2
EFVYDLFEAATGMR 1,679.75006 0.58 115.4 3
LSEMTESIK 1,052.50595 0.21 39.4 2
IIQQALEGLPGGPYENLESR 2,183.12216 0.45 59.9 2
LADIMTILGSIDIIMGEVDR 2,206.12245 0.69 98.8 2
MMHNFFR 1,045.41095 0.26 29.7 7
AIIQYLPYVTR 1,335.75504 0.46 52.9 5
LSEMTESIK 1,068.50087 0.21 42.8 3
LADIMTILGSIDIIMGEVDR 2,238.11229 0.69 124.1 6
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 0 46.78 53.22 49 STR-THY
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 1.87178 0.00011 LAM_high