last update : january 2015
Public data retrieved in 2014
ATCG01110 protein group
Protein ATCG01110
|
Master Protein |
AtCg01110 |
Description (curated) |
Encodes the 49KDa plastid NAD(P)H dehydrogenase subunit H protein. Its transcription is regulated by an ndhF-specific plastid sigma factor, SIG4. |
Calculated MW (PPDB) |
45.5 |
Calculated PI (PPDB) |
5.39 |
Length |
393 |
|
Curated Annotation
|
Description (curated) |
|
Function (curated) |
|
Localization (curated) |
|
Localization (validated) |
Yes
|
References |
|
Curated Protein Name |
|
Publication (PPDB) |
|
|
Peptides
|
Sequence |
Monoisotopic mass |
Retention Time |
Score |
Observed MS/MS count |
NPIFLER |
887.48646 |
0.33 |
55 |
2 |
AIIQYLPYVTR |
1,335.75504 |
0.46 |
52.9 |
5 |
IGGIAADLPYGWIDK |
1,587.82964 |
0.52 |
47.5 |
1 |
IIQQALEGLPGGPYENLESR |
2,183.12216 |
0.45 |
59.9 |
2 |
KPSPTFELSK |
1,132.61279 |
0.25 |
47.7 |
10 |
VIMLELSR |
991.53719 |
0.35 |
51 |
6 |
LSEMTESIK |
1,052.50595 |
0.21 |
39.4 |
2 |
EFVYDLFEAATGMR |
1,679.75006 |
0.58 |
115.4 |
3 |
LADIMTILGSIDIIMGEVDR |
2,206.12245 |
0.69 |
98.8 |
2 |
IRPPGFINLQILPELVK |
1,946.17163 |
0.54 |
76.7 |
9 |
MMHNFFR |
1,045.41095 |
0.26 |
29.7 |
7 |
LADIMTILGSIDIIMGEVDR |
2,238.11229 |
0.69 |
124.1 |
6 |
LSEMTESIK |
1,068.50087 |
0.21 |
42.8 |
3 |
Reference of the experiment |
Reference date |
score % of enveloppe |
score % of thylakoïd |
score % of stroma |
Total spectral count |
Localization Score |
at_chloro_v1 |
2010 06 |
0 |
46.78 |
53.22 |
49 |
STR-THY |
Reference of the experiment |
Reference date |
Log Fold Change |
pValue |
Curated Protein Complex Classes |
Differentially distributed proteins high or medium |
thylakoïd_sub_compartments |
2013-10-01 00:00:00 CEST |
1.87178 |
0.00011 |
|
LAM_high |