last update : january 2015

Public data retrieved in 2014



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ATCG00860 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein ATCG00860
Master Protein AtCg00860
Description (curated) Encodes an unknown protein. This gene is regulated by AtSIG6 transcriptionally.
Calculated MW (PPDB) 269.56
Calculated PI (PPDB) 8.87
Length 2,294
Curated Annotation
Description (curated) YCF2.1 (YCF2-A) essential protein, chloroplast encoded /
Function (curated) unknown
Localization (curated) Ch/S
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
SILLDPSFIQTEGR 1,574.83038 0.48 95.3 11
EQDVSFVPSR 1,162.56181 0.30 41 2
EFLVQFSTLR 1,238.66588 0.48 32.5 2
SEIHIYELK 1,130.59714 0.32 34.5 1
ISCGNYLEDQKR 1,472.65651 0.25 73.2 1
SIIDTNTIR 1,031.56111 0.30 29.8 2
DLIGNDTLNHR 1,266.63164 0.28 29 1
EFFADEEMSK 1,247.50157 0.30 31.5 2
AYSELQTEFEK 1,343.62447 0.35 52.7 3
EFFADEEMSK 1,263.49649 0.31 21.2 1
EIVNIFK 861.49596 0.39 31 1
NILVIASTHIPQK 1,432.84016 0.37 51.1 2
LIVSLLYLTK 1,161.73726 0.52 53.5 1
NVSSNIQYDSTR 1,382.64259 0.24 80.9 5
NLISEISSK 989.53929 0.37 27.7 1
GLLPIPMNSIGPR 1,395.75438 0.44 33.7 1
GLLTSQTDPPTSIYK 1,619.84064 0.37 54.9 2
EVFNFRDESK 1,269.59891 0.29 29.9 1
AIYSIADISGTPLIEGQR 1,903.00504 0.50 109.2 3
EIESDRFPK 1,119.55600 0.22 36.4 5
IFSILLLR 973.63240 0.53 68.8 1
SILVIGSIGTGR 1,171.69241 0.42 76.2 6
NFEYGIQR 1,025.49300 0.30 36.8 3
NDSGYQMIEQPGTIYLR 2,015.92581 0.42 84.8 1
SSLISSFSK 954.50218 0.34 38.7 2
VVFASNNIMEAVNQYR 1,885.89917 0.45 85.4 1
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 98.07 1.93 0 50 ENV