last update : january 2015

Public data retrieved in 2014



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ATCG00800 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein ATCG00800
Master Protein AtCg00800
Description (curated) encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex
Calculated MW (PPDB) 25.18
Calculated PI (PPDB) 9.51
Length 218
Curated Annotation
Description (curated) RPS3 30S ribosomal protein S3, chloroplast encoded /
Function (curated) translation stroma
Localization (curated) Ch/S
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
RVEELQMNVQK 1,404.70306 0.20 82.4 53
VEELQMNVQK 1,232.60704 0.21 53.8 2
IDLIQIIIYMGFPK 1,678.93675 0.67 92.9 4
VPLQTIEAK 997.58076 0.27 55.8 47
ISSGMEGIAR 1,019.50693 0.25 43.4 2
LNIAITR 799.49156 0.30 58.6 12
KAIELTEQANTK 1,344.72485 0.20 55.2 3
ISNPYGDPNILAEFIAGQLK 2,159.12619 0.63 90.6 29
KLNIAITR 927.58652 0.25 69.2 23
YSEGLEEDKK 1,196.55605 0.17 57.9 6
GIQVQIAGR 940.54536 0.27 76.8 19
IDLIQIIIYMGFPK 1,694.93167 0.67 65.6 1
ISSGMEGIAR 1,051.49676 0.20 79 81
INPLGFR 815.46533 0.34 43.6 19
IDGKEIAR 900.50284 0.16 53.4 4
LGTTQSHHSLWFAQPK 1,836.92709 0.32 44.2 3
RIDLIQIIIYMGFPK 1,835.03786 0.60 31.6 1
IDYCSYTVR 1,166.49136 0.35 40.3 6
ISSGMEGIAR 1,035.50185 0.19 61.3 10
TIYGVLGIK 962.58002 0.42 55.3 9
KYSEGLEEDKK 1,324.65100 0.15 64.8 19
AIELTEQANTK 1,216.62990 0.25 93.9 88
VEELQMNVQK 1,248.60196 0.22 64.3 8
EGRVPLQTIEAK 1,339.74591 0.26 65.2 7
LLIEDKPR 982.58110 0.23 63.5 30
RVEELQMNVQK 1,388.70814 0.20 55.9 9
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 17.62 0 82.38 454 STR-ENV
Reference of the experiment Reference date Sample CAM Binding Protein
cam_bp 2013-01-01 00:00:00 CET Arabidopsis_stroma;Arabidopsis_membranes;Spinach_stroma_env;
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST -0.01514 1 -