last update : january 2015

Public data retrieved in 2014



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ATCG00790 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein ATCG00790
Master Protein AtCg00790
Description (curated) chloroplast gene encoding a ribosomal protein L16, which is a constituent of 50S large ribosomal subunit
Calculated MW (PPDB) 15.29
Calculated PI (PPDB) 11.62
Length 135
Curated Annotation
Description (curated) RPL16 50S ribosomal protein L16, chloroplast encoded /
Function (curated) translation stroma
Localization (curated) Ch/S
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
LKGISSR 759.46025 0.13 36.5 3
YALQTLEPAWITSR 1,647.86203 0.51 36.2 3
IFPDKPVTVRPAETR 1,724.95731 0.26 37.7 5
MPIKTQFIISE 1,337.69006 0.38 55 5
QIEAGRR 828.45656 0.07 30 1
ILYEMGGVPENIAR 1,592.78677 0.36 82.5 12
GNRICFGR 969.44499 0.24 49.8 3
ILYEMGGVPENIAR 1,576.79186 0.36 51 5
ILYEMGGVPENIAR 1,560.79694 0.41 34.2 2
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 44.42 0 55.58 34 STR-ENV
Reference of the experiment Reference date Sample CAM Binding Protein
cam_bp 2013-01-01 00:00:00 CET Arabidopsis_stroma;Arabidopsis_membranes;
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 1.20495 0.00472 LAM_high