last update : january 2015

Public data retrieved in 2014



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ATCG00670 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein ATCG00670
Master Protein AtCg00670
Description (curated) Encodes the only ClpP (caseinolytic protease) encoded within the plastid genome. Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). Part of the 350 kDa chloroplast Clp complex. The name reflects nomenclature described i
Calculated MW (PPDB) 22.09
Calculated PI (PPDB) 4.97
Length 196
Curated Annotation
Description (curated) ClpP1 the only chloroplast encoded ClpP protease, chloroplast encoded (EC 3.4.21.92) /
Function (curated) chaperone and protease
Localization (curated) Ch/E & Ch/S
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
IAFPHAR 810.45003 0.24 43.6 5
PIWVISEDMER 1,389.65982 0.42 73 4
VMIHQPASSFYEAQTGEFILEAEELLK 3,111.51097 0.66 56.5 1
PIWVISEDMER 1,405.65474 0.44 32.1 1
VMIHQPASSFYEAQTGEFILEAEELLK 3,095.51605 0.65 112.4 4
VMIHQPASSFYEAQTGEFILEAEELLK 3,079.52113 0.64 84.5 2
SPGEGDTSWVDIYNR 1,694.75359 0.42 130 13
TGKPIWVISEDMER 1,675.82391 0.37 62.1 3
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 24.23 0 75.77 33 STR-ENV
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 0.16667 0.48959 -