last update : january 2015
Public data retrieved in 2014
ATCG00380 protein group
|
Protein ATCG00380
|
| Master Protein |
AtCg00380 |
| Description (curated) |
Chloroplast encoded ribosomal protein S4 |
| Calculated MW (PPDB) |
23.24 |
| Calculated PI (PPDB) |
10.32 |
| Length |
201 |
|
|
Curated Annotation
|
| Description (curated) |
RPS4 30S ribosomal protein S4, chloroplast encoded / |
| Function (curated) |
translation stroma |
| Localization (curated) |
Ch/S |
| Localization (validated) |
Yes
|
| References |
|
| Curated Protein Name |
|
| Publication (PPDB) |
|
|
|
Peptides
|
| Sequence |
Monoisotopic mass |
Retention Time |
Score |
Observed MS/MS count |
| GSTGQVLLQLLEMR |
1,575.82900 |
0.55 |
76.3 |
16 |
| QLVNHGHILVNGR |
1,455.80582 |
0.23 |
74.2 |
4 |
| DIITVKDEQNSR |
1,416.72084 |
0.23 |
79.7 |
48 |
| INELLVVEYYSR |
1,496.78743 |
0.49 |
93.1 |
5 |
| AGSDLRNQSR |
1,102.54790 |
0.08 |
39.6 |
3 |
| GSTGQVLLQLLEMR |
1,559.83408 |
0.56 |
72.6 |
11 |
| IRLEEKQK |
1,042.61345 |
0.12 |
31.5 |
1 |
| RLGALPGLTSK |
1,111.67130 |
0.29 |
59.1 |
14 |
| LDNILFR |
889.50212 |
0.39 |
59.8 |
21 |
| LGALPGLTSK |
955.57019 |
0.33 |
53.3 |
12 |
| LGMALTIPQAR |
1,169.65903 |
0.39 |
35.6 |
2 |
| GSTGQVLLQLLEMR |
1,543.83916 |
0.59 |
68.5 |
3 |
| IVDIPSYR |
961.52325 |
0.33 |
40 |
7 |
| LGMALTIPQAR |
1,201.64886 |
0.34 |
85.2 |
54 |
| FHYGLTEHQLLK |
1,484.77756 |
0.33 |
61.3 |
7 |
| LGMALTIPQAR |
1,185.65395 |
0.33 |
56.3 |
10 |
| Reference of the experiment |
Reference date |
score % of enveloppe |
score % of thylakoïd |
score % of stroma |
Total spectral count |
Localization Score |
| at_chloro_v1 |
2010 06 |
13.68 |
0 |
86.32 |
206 |
STR |
| Reference of the experiment |
Reference date |
Log Fold Change |
pValue |
Curated Protein Complex Classes |
Differentially distributed proteins high or medium |
| thylakoïd_sub_compartments |
2013-10-01 00:00:00 CEST |
0.15363 |
0.61047 |
|
- |