last update : january 2015

Public data retrieved in 2014



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ATCG00380 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein ATCG00380
Master Protein AtCg00380
Description (curated) Chloroplast encoded ribosomal protein S4
Calculated MW (PPDB) 23.24
Calculated PI (PPDB) 10.32
Length 201
Curated Annotation
Description (curated) RPS4 30S ribosomal protein S4, chloroplast encoded /
Function (curated) translation stroma
Localization (curated) Ch/S
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
GSTGQVLLQLLEMR 1,575.82900 0.55 76.3 16
GSTGQVLLQLLEMR 1,559.83408 0.56 72.6 11
RLGALPGLTSK 1,111.67130 0.29 59.1 14
IVDIPSYR 961.52325 0.33 40 7
AGSDLRNQSR 1,102.54790 0.08 39.6 3
LGMALTIPQAR 1,201.64886 0.34 85.2 54
QLVNHGHILVNGR 1,455.80582 0.23 74.2 4
LGMALTIPQAR 1,169.65903 0.39 35.6 2
DIITVKDEQNSR 1,416.72084 0.23 79.7 48
LGMALTIPQAR 1,185.65395 0.33 56.3 10
GSTGQVLLQLLEMR 1,543.83916 0.59 68.5 3
LGALPGLTSK 955.57019 0.33 53.3 12
FHYGLTEHQLLK 1,484.77756 0.33 61.3 7
LDNILFR 889.50212 0.39 59.8 21
INELLVVEYYSR 1,496.78743 0.49 93.1 5
IRLEEKQK 1,042.61345 0.12 31.5 1
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 13.68 0 86.32 206 STR
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 0.15363 0.61047 -