last update : january 2015

Public data retrieved in 2014



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ATCG00065 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein ATCG00065
Master Protein AtCg00065
Description (curated) chloroplast gene encoding ribosomal protein s12. The gene is located in three distinct loci on the chloroplast genome and is transpliced to make one transcript.
Calculated MW (PPDB) 13.76
Calculated PI (PPDB) 11.57
Length 38
Curated Annotation
Description (curated) RPS12B 30S ribosomal protein S12, chloroplast encoded /
Function (curated) translation stroma
Localization (curated) Ch/S
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
VKDLPGVR 882.52866 0.19 42.2 7
GTLDAVGVK 858.48103 0.26 50.8 8
SPALRGCPQR 1,131.54546 0.14 38.4 5
KPNSALRK 912.55046 0.04 27.1 1
GTLDAVGVKDRQQGR 1,598.84880 0.19 34.8 1
VYTITPK 820.46944 0.23 37 1
KPNSALR 784.45550 0.10 37.2 6
GTLDAVGVKDR 1,129.60908 0.22 74.9 30
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 8.34 16.05 75.62 48 STR-THY