last update : january 2015

Public data retrieved in 2014

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ATCG00020 protein group

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Protein ATCG00020
Master Protein	AtCg00020
Description (curated)	Encodes chlorophyll binding protein D1, a part of the photosystem II reaction center core
Calculated MW (PPDB)	38.93
Calculated PI (PPDB)	5.12
Length	353

Curated Annotation
Description (curated)	PSBA (D1) chlorophyll binding protein D1, subunit of the photosystem II reaction center, chloroplast encoded /
Function (curated)	PS PSII
Localization (curated)	Ch/Th
Localization (validated)	Yes
References
Curated Protein Name
Publication (PPDB)	15322131 (Thylakoids) 18431481 (Total Chloroplast) 16461379 (Plastoglobules) 16414959 (Plastoglobules) 15862092 (Envelope)

Peptides
Sequence	Monoisotopic mass	Retention Time	Score	Observed MS/MS count
ANLGMEVMHER	1,301.58559	0.24	56	2
VINTWADIINR	1,313.70915	0.45	82.4	19
LIFQYASFNNSR	1,458.72551	0.43	78.9	48
VINTWADIINRANLGMEVMHER	2,613.27910	0.46	79.7	2
EWELSFR	965.46065	0.44	29.6	2
RESESLWGR	1,118.54683	0.25	45.6	2
ANLGMEVMHER	1,333.57542	0.21	52	26
ANLGMEVMHER	1,317.58050	0.19	58.5	29
ANLGMEVMHER	1,349.57034	0.22	73.5	133
ETTENESANEGYR	1,498.61714	0.17	98.5	87
ESESLWGR	962.44572	0.30	32.7	2
FGQEEETYNIVAAHGYFGR	2,187.00203	0.42	113.3	9
VINTWADIINRANLGMEVMHER	2,581.28926	0.53	65.1	1
TAILERR	899.51883	0.32	43.4	57

Reference of the experiment	Reference date	Log Fold Change	pValue	Curated Protein Complex Classes	Differentially distributed proteins high or medium
thylakoïd_sub_compartments	2013-10-01 00:00:00 CEST	-2.04594	0		BBY_high

Reference of the experiment	Reference date	score % of enveloppe	score % of thylakoïd	score % of stroma	Total spectral count	Localization Score
at_chloro_v1	2010 06	1.1	98.9	0	394	THY