last update : january 2015

Public data retrieved in 2014



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AT5G62790 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT5G62790
Master Protein AT5G62790.1
Description (curated) DXR (1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE)
Calculated MW (PPDB) 51.96
Calculated PI (PPDB) 6.57
Length 477
Curated Annotation
Description (curated) DXR 1-deoxy-D-xylulose 5-phosphate reductoisomerase
Function (curated) metabolism isoprenoids
Localization (curated) Ch/S
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
AVEMFIDEK 1,112.50594 0.31 58.3 9
EYAANVQLSSGARPVHA 1,768.88557 0.28 36.3 1
LPILYTMSWPDR 1,506.75407 0.47 58.2 3
VVELTCDKHR 1,246.59755 0.18 56 1
AGGTMTGVLSAANEK 1,421.68198 0.25 101.7 7
VVALAAGSNVTLLADQVRR 1,952.11662 0.40 27.5 1
LEIIPGEQGVIEVAR 1,621.90384 0.45 61.6 13
KIILTASGGAFR 1,232.72404 0.31 45.2 2
IILTASGGAFR 1,104.62909 0.36 82.2 14
EYAANVQLSSGAR 1,364.66838 0.28 90.3 5
YPSMDLAYAAGR 1,345.59721 0.32 83.2 1
ITVDSATLFNK 1,207.64482 0.37 74.6 4
LGSLTFK 764.44321 0.32 40.9 1
AGGTMTGVLSAANEK 1,437.67690 0.24 101.7 35
FKPALVAVR 999.62288 0.28 37.8 7
ETLIAGGPFVLPLANK 1,638.93442 0.52 96.6 13
ISYLDIFK 997.54840 0.50 59.2 8
VVALAAGSNVTLLADQVR 1,796.01552 0.45 108.1 17
VQQQQQPPPAWPGR 1,615.82190 0.30 40.4 2
NESLINELK 1,058.56074 0.36 46.8 7
AVEMFIDEK 1,096.51102 0.30 34.5 1
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 0 0 100 143 STR
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 0 1 -