last update : january 2015
Public data retrieved in 2014
AT5G60600 protein group
|
Protein AT5G60600
|
| Master Protein |
AT5G60600.1 |
| Description (curated) |
GcpE (CHLOROPLAST BIOGENESIS 4); 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
| Calculated MW (PPDB) |
82.25 |
| Calculated PI (PPDB) |
6.01 |
| Length |
741 |
|
|
Curated Annotation
|
| Description (curated) |
ISPG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
| Function (curated) |
metabolism isoprenoids |
| Localization (curated) |
Ch/S |
| Localization (validated) |
Yes
|
| References |
|
| Curated Protein Name |
|
| Publication (PPDB) |
|
|
|
Peptides
|
| Sequence |
Monoisotopic mass |
Retention Time |
Score |
Observed MS/MS count |
| LQQGVAPFEEK |
1,244.64004 |
0.30 |
50.3 |
9 |
| VNPGNFADRR |
1,144.57370 |
0.22 |
25.7 |
2 |
| VAECFDKIR |
1,127.52806 |
0.30 |
58.4 |
7 |
| EGEEVDYR |
995.41956 |
0.21 |
27 |
2 |
| DGSVLMSISLDQLK |
1,536.77049 |
0.48 |
106.3 |
7 |
| IQTMTTSDTK |
1,156.52818 |
0.13 |
52.8 |
7 |
| DITGTVDEVMR |
1,266.57616 |
0.34 |
85.5 |
7 |
| IMSYYGDSPR |
1,219.51791 |
0.26 |
42.4 |
4 |
| LVVGMPFKDLATVDSILLR |
2,118.17580 |
0.55 |
52.4 |
3 |
| DLATVDSILLR |
1,214.68703 |
0.50 |
77.7 |
10 |
| GDEPYEELEILK |
1,433.69254 |
0.45 |
57.4 |
1 |
| TLFDLQEISAEIR |
1,533.80383 |
0.54 |
81.8 |
4 |
| IQTMTTSDTKDITGTVDEVMR |
2,405.09378 |
0.33 |
88 |
5 |
| IADKGADIVR |
1,056.59271 |
0.19 |
68.7 |
15 |
| VNPGNFADR |
988.47260 |
0.24 |
36.8 |
1 |
| ELPPVDDQVAR |
1,237.63023 |
0.28 |
53.9 |
10 |
| RTGDLPVQK |
1,012.56651 |
0.17 |
28.5 |
1 |
| GMVESAFEFAR |
1,274.56007 |
0.39 |
85.8 |
11 |
| GIAMTEATDALIGLIK |
1,647.87528 |
0.52 |
135.4 |
9 |
| TGDLPVQK |
856.46541 |
0.19 |
42.7 |
1 |
| ASNPVIMVQAYR |
1,379.68669 |
0.36 |
54.8 |
2 |
| IGTNHGSLSDR |
1,155.56322 |
0.16 |
68.7 |
18 |
| NTSFNLLQGCR |
1,299.58771 |
0.41 |
72 |
1 |
| GIAMTEATDALIGLIK |
1,615.88544 |
0.60 |
73.2 |
1 |
| NIDATMILHDVPFTEDK |
1,989.93533 |
0.47 |
56.9 |
1 |
| SAIGIGTLLQDGLGDTIR |
1,798.97882 |
0.55 |
126.7 |
9 |
| TVMVGNVALGSEHPIR |
1,710.87224 |
0.32 |
115.1 |
5 |
| VSLTEPPEEEIDPCRR |
1,916.87852 |
0.35 |
82.2 |
5 |
| Reference of the experiment |
Reference date |
score % of enveloppe |
score % of thylakoïd |
score % of stroma |
Total spectral count |
Localization Score |
| at_chloro_v1 |
2010 06 |
0 |
0 |
100 |
151 |
STR |
| Reference of the experiment |
Reference date |
Log Fold Change |
pValue |
Curated Protein Complex Classes |
Differentially distributed proteins high or medium |
| thylakoïd_sub_compartments |
2013-10-01 00:00:00 CEST |
0 |
1 |
|
- |