last update : january 2015

Public data retrieved in 2014



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AT5G54270 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT5G54270
Master Protein AT5G54270.1
Description (curated) LHCB3 (LIGHT-HARVESTING CHLOROPHYLL BINDING PROTEIN 3)
Calculated MW (PPDB) 28.7
Calculated PI (PPDB) 4.96
Length 265
Curated Annotation
Description (curated) LHCB3*1 (LHCII-3) photosystem II light harvesting complex gene 3, chlorophyll A-B binding protein, chloroplast precursor /
Function (curated) PS LHCII
Localization (curated) Ch/Th
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
ALEVIHGR 893.50826 0.20 57.9 60
VKEIKNGR 942.56100 0.06 41.4 3
YLGPFSVQTPSYLTGEFPGDYGWDTAGLSADPEAFAK 3,953.83110 0.63 162.6 1
LAMFSMFGFFVQAIVTGK 2,009.01537 0.72 86.9 3
NRALEVIHGR 1,163.65228 0.20 48.1 3
AGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGFR 4,561.36772 0.82 69.2 1
LAMFSMFGFFVQAIVTGK 1,993.02045 0.69 36.2 2
GPLENLLDHLDNPVANNAWAFATK 2,619.30808 0.60 102.1 4
VDFKEPVWFK 1,293.67570 0.41 48.8 16
WAMLGAFGCITPEVLQK 1,926.92189 0.57 51.9 2
YLGPFSVQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNR 4,223.97513 0.61 109.3 1
LAMFSMFGFFVQAIVTGK 2,041.00520 0.73 133.1 109
INGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELK 3,765.80486 0.64 148.4 5
LAMFSMFGFFVQAIVTGK 2,057.00012 0.70 153.6 88
LAMFSMFGFFVQAIVTGK 2,025.01028 0.70 133.7 85
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST -2.01263 0 BBY_high
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 0.55 97.58 1.88 381 THY