last update : january 2015
Public data retrieved in 2014
AT5G50920 protein group
Protein AT5G50920
|
Master Protein |
AT5G50920.1 |
Description (curated) |
CLPC (HEAT SHOCK PROTEIN 93-V); ATP binding / ATPase |
Calculated MW (PPDB) |
103.45 |
Calculated PI (PPDB) |
6.36 |
Length |
929 |
|
Curated Annotation
|
Description (curated) |
ClpC1 (HSP93-V, Hsp100) ATP-dependent Clp protease ATP-binding subunit, chloroplast precursor / |
Function (curated) |
chaperone and protease |
Localization (curated) |
Ch/E & Ch/S |
Localization (validated) |
Yes
|
References |
|
Curated Protein Name |
|
Publication (PPDB) |
|
|
Peptides
|
Sequence |
Monoisotopic mass |
Retention Time |
Score |
Observed MS/MS count |
LLEDSMAEKMLAR |
1,569.73781 |
0.29 |
73.9 |
4 |
LGHNFVGTEQILLGLIGEGTGIAAK |
2,507.37465 |
0.60 |
105.6 |
29 |
EIELQVTER |
1,115.58221 |
0.31 |
71.9 |
62 |
SLVTEELK |
917.50693 |
0.31 |
40.7 |
15 |
ALAAYYFGSEEAMIR |
1,722.79225 |
0.44 |
76.6 |
10 |
VEVEKIIGR |
1,041.61818 |
0.27 |
61.7 |
5 |
LLEDSMAEK |
1,050.49030 |
0.19 |
59.5 |
22 |
NPNRPIASFIFSGPTGVGK |
1,958.03731 |
0.43 |
112.1 |
74 |
LDPVVGR |
754.43370 |
0.23 |
51.7 |
6 |
DREIELR |
929.49301 |
0.23 |
28.2 |
1 |
HAQVPEEAR |
1,035.50972 |
0.14 |
53.9 |
16 |
YRGEFEER |
1,084.49371 |
0.19 |
42 |
24 |
LDMSEFMER |
1,188.47908 |
0.27 |
50.5 |
20 |
VVQILGRR |
939.59773 |
0.23 |
24.9 |
1 |
NNPCLIGEPGVGK |
1,344.63429 |
0.33 |
78.4 |
10 |
LLKMEETLHKR |
1,428.77585 |
0.16 |
51.5 |
5 |
IGFDLDYDEK |
1,213.55025 |
0.42 |
91.2 |
9 |
KKEIELQVTER |
1,371.77212 |
0.21 |
69.6 |
5 |
LIGSPPGYVGYTEGGQLTEAVR |
2,263.14836 |
0.43 |
136.4 |
34 |
VIMLAQEEARR |
1,346.69759 |
0.25 |
49.3 |
16 |
NTLLIMTSNVGSSVIEK |
1,836.95023 |
0.41 |
130.9 |
51 |
EKNEAVRGQDFEK |
1,548.75316 |
0.17 |
67.8 |
7 |
KVITLDMGLLVAGTK |
1,589.90617 |
0.39 |
100.4 |
13 |
RIIGQDEAVK |
1,127.62982 |
0.19 |
36.4 |
6 |
GELQCIGATTLDEYR |
1,715.76718 |
0.49 |
40 |
2 |
EKNEAVR |
844.44023 |
0.05 |
37 |
2 |
VVQILGR |
783.49663 |
0.28 |
58.5 |
35 |
VPEPTVDETIQILK |
1,580.86610 |
0.45 |
121.9 |
58 |
AIDLIDEAGSR |
1,158.58803 |
0.35 |
106.4 |
118 |
VLENLGADPSNIR |
1,396.73099 |
0.33 |
90 |
153 |
SLVTEELKQYFRPEFLNR |
2,268.19019 |
0.49 |
34 |
1 |
GELQCIGATTLDEYRK |
1,843.86214 |
0.42 |
82.2 |
28 |
QLTKLEVK |
957.58585 |
0.22 |
29 |
1 |
LDEMIVFR |
1,021.52661 |
0.43 |
62.2 |
2 |
VSTDESDR |
907.38829 |
0.09 |
51.8 |
12 |
MEETLHK |
902.41675 |
0.13 |
31.9 |
3 |
TAIAEGLAQR |
1,028.56142 |
0.26 |
81.3 |
134 |
LRHAQVPEEAR |
1,304.69488 |
0.18 |
30 |
1 |
KEIELQVTER |
1,243.67717 |
0.25 |
64.9 |
4 |
MEETLHK |
918.41167 |
0.12 |
38.6 |
2 |
ELEKELR |
915.50250 |
0.18 |
31.7 |
1 |
MPTLEEYGTNLTK |
1,511.71773 |
0.36 |
88.4 |
22 |
AEVSAIQAK |
915.50250 |
0.18 |
62.4 |
36 |
IIGQDEAVKAISR |
1,398.78302 |
0.30 |
76.9 |
3 |
VLELSLEEAR |
1,157.62915 |
0.38 |
100.3 |
113 |
IIGQDEAVK |
971.52872 |
0.22 |
65.8 |
31 |
TKNNPCLIGEPGVGK |
1,573.77693 |
0.28 |
79.3 |
13 |
LAEEGKLDPVVGR |
1,381.75645 |
0.27 |
90.5 |
86 |
HAQVPEEARELEK |
1,534.77391 |
0.23 |
35.2 |
4 |
RIGFDLDYDEKDSSYNR |
2,091.94971 |
0.35 |
54.2 |
2 |
VITLDMGLLVAGTK |
1,461.81122 |
0.45 |
102.9 |
47 |
VSTDESDRLLK |
1,261.65137 |
0.24 |
60.4 |
21 |
KLMEEIR |
949.49023 |
0.18 |
46.8 |
12 |
LDMSEFMER |
1,172.48416 |
0.38 |
24.7 |
1 |
RPYTVVLFDEIEK |
1,607.85585 |
0.44 |
81.5 |
17 |
HIEKDPALER |
1,206.63565 |
0.17 |
62.1 |
38 |
LDMSEFMER |
1,156.48924 |
0.43 |
43 |
1 |
VIMLAQEEAR |
1,158.60664 |
0.30 |
50.5 |
3 |
RVLELSLEEAR |
1,313.73026 |
0.33 |
60 |
12 |
NTLLIMTSNVGSSVIEK |
1,804.96039 |
0.45 |
66.6 |
1 |
RLGHNFVGTEQILLGLIGEGTGIAAK |
2,663.47575 |
0.54 |
44.2 |
3 |
LAEEGKLDPVVGRQPQIER |
2,133.15413 |
0.28 |
49.2 |
5 |
ALAAYYFGSEEAMIR |
1,706.79733 |
0.44 |
93.1 |
11 |
QSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALAR |
3,815.04677 |
0.74 |
81.1 |
5 |
AHPDVFNMMLQILEDGR |
2,032.93460 |
0.46 |
73.4 |
3 |
NTLLIMTSNVGSSVIEK |
1,820.95531 |
0.40 |
142.3 |
20 |
MVGENNEVTANVGGGSSSNK |
1,981.86461 |
0.23 |
177.8 |
89 |
LDEMIVFR |
1,037.52153 |
0.36 |
67.8 |
15 |
SMGINLKDAR |
1,135.56552 |
0.22 |
50.7 |
7 |
LDMSEFMER |
1,220.46892 |
0.31 |
57.5 |
49 |
LDEMIVFR |
1,053.51645 |
0.38 |
56.1 |
43 |
EGEGVAAR |
787.38237 |
0.11 |
51.5 |
25 |
FLPDKAIDLIDEAGSR |
1,758.91516 |
0.45 |
98.4 |
30 |
SMGINLK |
793.40036 |
0.23 |
51.6 |
10 |
QLGHNYIGSEHLLLGLLR |
2,032.12172 |
0.46 |
78.2 |
13 |
YTDESLVAAAQLSYQYISDR |
2,292.09096 |
0.58 |
119.5 |
5 |
RFQPVKVPEPTVDETIQILK |
2,336.31032 |
0.42 |
41.5 |
1 |
MEETLHKR |
1,058.51785 |
0.10 |
42.4 |
3 |
NEAVRGQDFEK |
1,291.61562 |
0.18 |
48 |
3 |
VIMLAQEEAR |
1,174.60156 |
0.27 |
72.5 |
32 |
IASGDVPETIEGKK |
1,442.76161 |
0.25 |
72 |
64 |
EIADILLKEVFER |
1,573.87149 |
0.55 |
70.5 |
6 |
IASGDVPETIEGK |
1,314.66666 |
0.29 |
86.1 |
85 |
MVGENNEVTANVGGGSSSNK |
1,949.87477 |
0.27 |
59 |
1 |
LDMSEFMER |
1,204.47400 |
0.29 |
69.5 |
26 |
MEETLHKR |
1,074.51277 |
0.09 |
39.9 |
11 |
SMGINLK |
777.40544 |
0.21 |
33.5 |
1 |
FQPVKVPEPTVDETIQILK |
2,180.20921 |
0.45 |
73 |
11 |
KVITLDMGLLVAGTK |
1,573.91126 |
0.39 |
86.1 |
3 |
IGFDLDYDEKDSSYNR |
1,935.84860 |
0.38 |
106 |
5 |
MPTLEEYGTNLTK |
1,527.71265 |
0.37 |
100.4 |
59 |
TVDFKNTLLIMTSNVGSSVIEK |
2,395.26678 |
0.57 |
40.9 |
1 |
QYFRPEFLNR |
1,368.69382 |
0.36 |
32 |
8 |
EIADILLK |
913.54840 |
0.41 |
65.8 |
43 |
GSGFVAVEIPFTPR |
1,475.77719 |
0.48 |
85.4 |
71 |
AHPDVFNMMLQILEDGR |
2,048.92952 |
0.50 |
102.7 |
9 |
VITLDMGLLVAGTK |
1,445.81630 |
0.44 |
112.2 |
17 |
AESETGEEGPMVTESDIQHIVSSWTGIPVEK |
3,357.55576 |
0.61 |
86.9 |
3 |
MVGENNEVTANVGGGSSSNK |
1,965.86969 |
0.23 |
162.6 |
28 |
VIMLAQEEAR |
1,190.59648 |
0.28 |
75.2 |
97 |
LLEDSMAEK |
1,066.48521 |
0.20 |
61.6 |
54 |
VVDEGYNPSYGAR |
1,425.65239 |
0.26 |
96 |
61 |
AHPDVFNMMLQILEDGR |
2,016.93968 |
0.45 |
85.7 |
11 |
Reference of the experiment |
Reference date |
score % of enveloppe |
score % of thylakoïd |
score % of stroma |
Total spectral count |
Localization Score |
at_chloro_v1 |
2010 06 |
61.47 |
5.23 |
33.3 |
2,411 |
ENV-STR |
Reference of the experiment |
Reference date |
Sample CAM Binding Protein |
cam_bp |
2013-01-01 00:00:00 CET |
Arabidopsis_stroma;Arabidopsis_membranes; |
Reference of the experiment |
Reference date |
Log Fold Change |
pValue |
Curated Protein Complex Classes |
Differentially distributed proteins high or medium |
thylakoïd_sub_compartments |
2013-10-01 00:00:00 CEST |
0.23801 |
0.38957 |
|
- |